RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Foxp4Q9DBY0 795 aaKnown RBP16.08■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Taf7Q9R1C0 341 aa16.08■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 SowahdQ8BY98 327 aa16.07■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Slurp2P0DP59 97 aa16.06■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Strn4P58404 760 aa16.06■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 ArsiQ32KI9 573 aa16.06■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 GckrQ91X44 587 aa16.06■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Frmpd3A0A140LIW3 1774 aa16.05■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Ddx60E9PZQ1 1711 aa16.05■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Erbb4Q61527 1308 aa16.05■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Golga2Q921M4 999 aa16.05■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Itgb4A2A863 1818 aa16.05■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Megf6Q80V70 1572 aa16.04■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Rapgefl1Q68EF8 662 aa16.04■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Wwc2Q6NXJ0 1187 aa16.04■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Slf2Q6P9P0 1278 aa16.04■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Fam122aQ9DB52 284 aa16.04■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Pde3aQ9Z0X4 1141 aa16.04■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Uhrf1bp1B2KF50 1429 aa16.03■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Col4a1P02463 1669 aa16.03■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Cyp2c68K7N6C2 491 aa16.03■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 NogP97466 232 aa16.03■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Dusp27Q148W8 1138 aa16.03■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Ciapin1Q8WTY4 309 aa16.03■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Irx6Q9ER75 438 aa16.03■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 EgfrQ01279 1210 aa16.02■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Arid3aQ62431 601 aa16.02■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 PrimpolQ6P1E7 537 aa16.02■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Cyp2d12Q8BVD2 504 aa16.02■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Slc39a6Q8C145 765 aa16.02■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Q8C6G1 249 aa16.02■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Klhdc4Q921I2 584 aa16.02■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Lama4P97927 1816 aa16.01■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Zscan21Q07231 555 aa16.01■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Morc2aQ69ZX6 1030 aa16■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Trim52Q8CDV4 233 aa16■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Tmem119Q8R138 280 aa16■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Exoc6Q8R313 802 aa16■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 PsapQ61207 557 aaKnown RBP15.99■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 NgdnQ9DB96 315 aaKnown RBP15.99■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 D830030K20RikE9PYQ5 218 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Wdr66E9Q743 1299 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Gm3043K7N693 218 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Gm16440K7N6G6 218 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Gm2244L7N2A3 218 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Gm3278L7N2D2 218 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Gm8271L7N2E2 218 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Klrk1O54709 232 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Npy5rO70342 466 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Esx1O88933 382 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Fkbp4P30416 458 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Bcl2l13P59017 434 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Ifit1bl2Q3U687 466 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Uspl1Q3ULM6 1089 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Gnl3lQ6PGG6 577 aaKnown RBP15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 B4galnt4Q766D5 1034 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Ncbp3Q8BZR9 615 aaKnown RBP15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Nlrp3Q8R4B8 1033 aa15.98■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Gja5Q01231 358 aa15.97■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 SympkQ80X82 1284 aa15.97■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Col4a5Q63ZW6 1691 aa15.97■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Col5a2Q3U962 1497 aa15.97■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Akap2O54931 893 aa15.96■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Atf5O70191 283 aa15.96■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Chpf2Q3UU43 768 aa15.96■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Gimap8Q75N62 688 aa15.96■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Pdzph1Q8BGR1 1238 aa15.96■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 St5Q924W7 1134 aa15.96■□□□□ 0.15
Ccdc28b-202ENSMUST00000106035 Duox1A2AQ92 1551 aa15.96■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Stox1B2RQL2 990 aa15.95■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Rtkn2Q14B46 604 aa15.95■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Cyp2c23E9Q5K4 494 aa15.94■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Tnnt1O88346 262 aa15.94■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Thrap3Q569Z6 951 aaKnown RBP15.94■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Unc5clQ6R653 518 aa15.94■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Pik3ap1Q9EQ32 811 aa15.94■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Ssc5dQ8BV57 1371 aa15.94■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Mrc1Q61830 1456 aa15.94■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Dlg5E9Q9R9 1921 aa15.94■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Plekhh1Q80TI1 1356 aa15.93■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Pde4bB1AWC9 736 aa15.93■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Pibf1E9Q6K3 756 aa15.93■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 CltaO08585 235 aa15.93■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Fkbp1aP26883 108 aaKnown RBP15.93■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Zc3h12cQ5DTV4 884 aa15.93■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Trim34aQ99PP6 485 aa15.93■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Gnai1B2RSH2 354 aa15.92■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Q3TQI7 289 aaKnown RBP15.92■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Gnai3Q9DC51 354 aa15.92■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Mapk8ip1Q9WVI9 707 aa15.92■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Zdbf2Q5SS00 2493 aaKnown RBP15.92■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Dctn1O08788 1281 aa15.91■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Igfbp6P47880 238 aa15.91■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Spire2Q8K1S6 718 aa15.91■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Cd248Q91V98 765 aa15.91■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 NpcdF8VQB8 469 aa15.9■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Ankle2Q6P1H6 964 aa15.9■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Gjd4Q8BSD4 364 aa15.9■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Strip1Q8C079 837 aa15.9■□□□□ 0.14
Ccdc28b-202ENSMUST00000106035 Ptcd1Q8C2E4 695 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms