RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 Kdm4aQ8BW72 1064 aa20.88■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Slx4ipQ9D7Y9 413 aa20.88■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Rbm27Q5SFM8 1060 aaKnown RBP20.87■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Ano8Q6PB70 1060 aa20.87■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Ush1cQ9ES64 910 aa20.87■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Ints3Q7TPD0 1041 aaKnown RBP20.87■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Rcan3Q9JKK0 239 aa20.87■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Tpm2P58774 284 aa20.86■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Cct4P80315 539 aaKnown RBP20.86■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Slc4a10Q5DTL9 1118 aa20.86■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Rnf214Q8BFU3 668 aaKnown RBP20.86■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Dlg5E9Q9R9 1921 aa20.86■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Elmsan1E9Q2I4 1089 aaKnown RBP20.85■□□□□ 0.93
Ddx28-201ENSMUST00000058579 VgfQ0VGU4 617 aa20.85■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Slc35g1Q8BY79 368 aa20.85■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Atg3Q9CPX6 314 aa20.85■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Rad50P70388 1312 aa20.85■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Amotl1Q9D4H4 968 aa20.85■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Mlh1Q9JK91 760 aa20.85■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Zscan25B2RX31 543 aa20.84■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Zap70P43404 618 aa20.84■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Tlr7P58681 1050 aa20.84■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Eif4a1P60843 406 aaKnown RBP20.84■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Stk3Q9JI10 497 aa20.84■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Sipa1l2Q80TE4 1722 aa20.84■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Bend3Q6PAL0 825 aa20.83■□□□□ 0.93
Ddx28-201ENSMUST00000058579 Scaf1Q5U4C3 1256 aaKnown RBP20.83■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Amotl2Q8K371 772 aa20.83■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Echdc1Q9D9V3 322 aa20.83■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Exoc6bA6H5Z3 810 aa20.82■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Becn1O88597 448 aa20.82■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Brpf1B2RRD7 1212 aa20.81■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Fyb1O35601 819 aa20.81■□□□□ 0.92
Ddx28-201ENSMUST00000058579 E4f1Q8CCE9 783 aa20.81■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Nup153E9Q3G8 1462 aaKnown RBP20.81■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Cfdp1O88271 295 aaKnown RBP20.8■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Gjb2Q00977 226 aa20.8■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Nol12Q8BG17 217 aa20.8■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Ccar2Q8VDP4 922 aaKnown RBP20.8■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Pank2Q3U4S0 443 aa20.8■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Arhgef1Q61210 920 aaKnown RBP20.8■□□□□ 0.92
Ddx28-201ENSMUST00000058579 DmtnQ9WV69 405 aa20.8■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Brf1Q8CFK2 676 aa20.79■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Phlpp1Q8CHE4 1687 aa20.79■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Fkbp4P30416 458 aa20.78■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Map3k13Q1HKZ5 959 aa20.78■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Mphosph10Q810V0 681 aaKnown RBP20.78■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Pof1bQ8K4L4 587 aa20.78■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Nrxn3Q6P9K9 1571 aa20.78■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Tmem2Q5FWI3 1383 aa20.78■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Rufy3Q9D394 469 aa20.78■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Erbb4Q61527 1308 aa20.77■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Unc13bQ9Z1N9 1602 aa20.77■□□□□ 0.92
Ddx28-201ENSMUST00000058579 Btbd11Q6GQW0 1109 aa20.76■□□□□ 0.91
Ddx28-201ENSMUST00000058579 TatQ8QZR1 454 aa20.76■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Chd1lQ9CXF7 900 aa20.76■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Tceal9Q9DD24 104 aa20.76■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Add2Q9QYB8 725 aa20.76■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Adcy9P51830 1353 aa20.76■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Abcc12Q80WJ6 1366 aa20.76■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Kdm6aO70546 1401 aa20.76■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Top1mtQ8R4U6 593 aa20.76■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Wdr93Q402B2 695 aa20.75■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Tgfb1i1Q62219 461 aa20.75■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Bms1Q6PGF5 1284 aaKnown RBP20.75■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Col1a2Q01149 1372 aa20.75■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Ppfia1B2RXQ2 1266 aa20.75■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Stx6Q9JKK1 255 aa20.75■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Pdia4P08003 638 aaKnown RBP20.74■□□□□ 0.91
Ddx28-201ENSMUST00000058579 EspnlQ3UYR4 1005 aa20.74■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Casc1Q6TDU8 730 aa20.74■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Pnma3Q8JZW8 466 aa20.74■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Zfp804bA0A0G2JGH6 1343 aa20.74■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Syt1P46096 421 aa20.74■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Olfml1Q8BSH2 233 aa20.74■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Mknk2Q8CDB0 459 aa20.74■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Smc3Q9CW03 1217 aaKnown RBP20.74■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Gse1Q3U3C9 1213 aa20.73■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Gzf1Q4VBD9 706 aa20.73■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Slain2Q8CI08 581 aa20.73■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Ripk4Q9ERK0 786 aa20.73■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Nkx2-3P97334 362 aa20.73■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Fam228bQ497Q6 232 aa20.73■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Tbc1d30Q69ZT9 766 aa20.73■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Taf5lQ91WQ5 589 aa20.73■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Rtn4Q99P72 1162 aaKnown RBP20.73■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Nphp3Q7TNH6 1325 aa20.72■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Ncoa4Q5U4H9 625 aa20.72■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Map3k2Q61083 619 aa20.72■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Tti2Q8BGV4 512 aa20.72■□□□□ 0.91
Ddx28-201ENSMUST00000058579 BcorQ8CGN4 1759 aa20.72■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Abcc4E9Q236 1325 aa20.71■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Mindy4Q3UQI9 744 aa20.71■□□□□ 0.91
Ddx28-201ENSMUST00000058579 PsapQ61207 557 aaKnown RBP20.71■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Ifit2Q64112 472 aa20.71■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Tex2Q6ZPJ0 1128 aaKnown RBP20.71■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Rbm10Q99KG3 930 aaKnown RBP20.71■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Ccdc173A0JLY1 547 aa20.71■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Pa2g4P50580 394 aaKnown RBP20.71■□□□□ 0.91
Ddx28-201ENSMUST00000058579 Anp32cQ64G17 123 aa20.71■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms