RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Ier5O89113 308 aa18.11■□□□□ 0.49
Nup54-201ENSMUST00000038514 Anp32cQ64G17 123 aa18.11■□□□□ 0.49
Nup54-201ENSMUST00000038514 Taok2Q6ZQ29 1240 aa18.11■□□□□ 0.49
Nup54-201ENSMUST00000038514 HypkQ9CR41 129 aa18.11■□□□□ 0.49
Nup54-201ENSMUST00000038514 Gm21190A0A0G2JGJ6 266 aa18.1■□□□□ 0.49
Nup54-201ENSMUST00000038514 Brpf1B2RRD7 1212 aa18.1■□□□□ 0.49
Nup54-201ENSMUST00000038514 Idi1P58044 227 aa18.1■□□□□ 0.49
Nup54-201ENSMUST00000038514 Hoxc9P09633 260 aa18.1■□□□□ 0.49
Nup54-201ENSMUST00000038514 Rad17Q6NXW6 688 aa18.09■□□□□ 0.49
Nup54-201ENSMUST00000038514 Ccdc173A0JLY1 547 aa18.09■□□□□ 0.49
Nup54-201ENSMUST00000038514 Sox12Q04890 314 aa18.09■□□□□ 0.49
Nup54-201ENSMUST00000038514 Olfml1Q8BSH2 233 aa18.09■□□□□ 0.49
Nup54-201ENSMUST00000038514 Zfp804bA0A0G2JGH6 1343 aa18.09■□□□□ 0.49
Nup54-201ENSMUST00000038514 Tnnt1O88346 262 aa18.08■□□□□ 0.48
Nup54-201ENSMUST00000038514 Wdr93Q402B2 695 aa18.08■□□□□ 0.48
Nup54-201ENSMUST00000038514 CoilQ5SU73 570 aa18.08■□□□□ 0.48
Nup54-201ENSMUST00000038514 BcorQ8CGN4 1759 aa18.08■□□□□ 0.48
Nup54-201ENSMUST00000038514 Rufy3Q9D394 469 aa18.08■□□□□ 0.48
Nup54-201ENSMUST00000038514 Adamtsl3G3UXC7 1706 aa18.07■□□□□ 0.48
Nup54-201ENSMUST00000038514 Cct4P80315 539 aaKnown RBP18.07■□□□□ 0.48
Nup54-201ENSMUST00000038514 Gjb2Q00977 226 aa18.07■□□□□ 0.48
Nup54-201ENSMUST00000038514 Nol12Q8BG17 217 aa18.07■□□□□ 0.48
Nup54-201ENSMUST00000038514 Nup153E9Q3G8 1462 aaKnown RBP18.07■□□□□ 0.48
Nup54-201ENSMUST00000038514 Cnksr1A2A9K7 700 aa18.06■□□□□ 0.48
Nup54-201ENSMUST00000038514 Irf5P56477 497 aa18.06■□□□□ 0.48
Nup54-201ENSMUST00000038514 Tlr7P58681 1050 aa18.06■□□□□ 0.48
Nup54-201ENSMUST00000038514 Bms1Q6PGF5 1284 aaKnown RBP18.05■□□□□ 0.48
Nup54-201ENSMUST00000038514 Add2Q9QYB8 725 aa18.05■□□□□ 0.48
Nup54-201ENSMUST00000038514 Fam184aE9PW83 1143 aa18.05■□□□□ 0.48
Nup54-201ENSMUST00000038514 Tbc1d31Q6NXY1 996 aa18.05■□□□□ 0.48
Nup54-201ENSMUST00000038514 DpydQ8CHR6 1025 aa18.04■□□□□ 0.48
Nup54-201ENSMUST00000038514 Pof1bQ8K4L4 587 aa18.04■□□□□ 0.48
Nup54-201ENSMUST00000038514 Atg3Q9CPX6 314 aa18.04■□□□□ 0.48
Nup54-201ENSMUST00000038514 Stk3Q9JI10 497 aa18.04■□□□□ 0.48
Nup54-201ENSMUST00000038514 Robo1O89026 1612 aa18.04■□□□□ 0.48
Nup54-201ENSMUST00000038514 Bach2P97303 839 aa18.04■□□□□ 0.48
Nup54-201ENSMUST00000038514 Stx6Q9JKK1 255 aa18.04■□□□□ 0.48
Nup54-201ENSMUST00000038514 Casc1Q6TDU8 730 aa18.03■□□□□ 0.48
Nup54-201ENSMUST00000038514 Bend3Q6PAL0 825 aa18.03■□□□□ 0.48
Nup54-201ENSMUST00000038514 Zscan22Q8BGS5 496 aa18.03■□□□□ 0.48
Nup54-201ENSMUST00000038514 NcapgE9PWG6 1004 aa18.02■□□□□ 0.48
Nup54-201ENSMUST00000038514 Fyb1O35601 819 aa18.02■□□□□ 0.48
Nup54-201ENSMUST00000038514 Ube2hP62257 183 aa18.02■□□□□ 0.48
Nup54-201ENSMUST00000038514 Zfp51Q3U4L8 781 aa18.02■□□□□ 0.48
Nup54-201ENSMUST00000038514 Slc4a10Q5DTL9 1118 aa18.02■□□□□ 0.48
Nup54-201ENSMUST00000038514 Tmem132eQ6IEE6 982 aa18.02■□□□□ 0.48
Nup54-201ENSMUST00000038514 Naa30Q8CES0 364 aa18.02■□□□□ 0.48
Nup54-201ENSMUST00000038514 Zap70P43404 618 aa18.02■□□□□ 0.47
Nup54-201ENSMUST00000038514 Brf1Q8CFK2 676 aa18.02■□□□□ 0.47
Nup54-201ENSMUST00000038514 Syt1P46096 421 aa18.01■□□□□ 0.47
Nup54-201ENSMUST00000038514 Eif4a1P60843 406 aaKnown RBP18.01■□□□□ 0.47
Nup54-201ENSMUST00000038514 Gsdma3Q5Y4Y6 464 aa18.01■□□□□ 0.47
Nup54-201ENSMUST00000038514 Samm50Q8BGH2 469 aa18.01■□□□□ 0.47
Nup54-201ENSMUST00000038514 Tti2Q8BGV4 512 aa18.01■□□□□ 0.47
Nup54-201ENSMUST00000038514 SrrtQ99MR6 875 aaKnown RBP18.01■□□□□ 0.47
Nup54-201ENSMUST00000038514 Smc3Q9CW03 1217 aaKnown RBP18.01■□□□□ 0.47
Nup54-201ENSMUST00000038514 Nphp3Q7TNH6 1325 aa18.01■□□□□ 0.47
Nup54-201ENSMUST00000038514 Med4Q9CQA5 270 aa18.01■□□□□ 0.47
Nup54-201ENSMUST00000038514 Adcy9P51830 1353 aa18■□□□□ 0.47
Nup54-201ENSMUST00000038514 Nom1Q3UFM5 854 aaKnown RBP18■□□□□ 0.47
Nup54-201ENSMUST00000038514 Ccdc178Q8CDV0 866 aa18■□□□□ 0.47
Nup54-201ENSMUST00000038514 Top1mtQ8R4U6 593 aa18■□□□□ 0.47
Nup54-201ENSMUST00000038514 Adcy5P84309 1262 aa17.99■□□□□ 0.47
Nup54-201ENSMUST00000038514 Hvcn1Q3U2S8 269 aa17.99■□□□□ 0.47
Nup54-201ENSMUST00000038514 EspnlQ3UYR4 1005 aa17.99■□□□□ 0.47
Nup54-201ENSMUST00000038514 Ano8Q6PB70 1060 aa17.99■□□□□ 0.47
Nup54-201ENSMUST00000038514 Echdc1Q9D9V3 322 aa17.99■□□□□ 0.47
Nup54-201ENSMUST00000038514 Ppfia1B2RXQ2 1266 aa17.99■□□□□ 0.47
Nup54-201ENSMUST00000038514 Gm10563F6WIE4 79 aa17.99■□□□□ 0.47
Nup54-201ENSMUST00000038514 Arhgef1Q61210 920 aaKnown RBP17.99■□□□□ 0.47
Nup54-201ENSMUST00000038514 Rps6ka5Q8C050 863 aa17.99■□□□□ 0.47
Nup54-201ENSMUST00000038514 Sytl4Q9R0Q1 673 aa17.99■□□□□ 0.47
Nup54-201ENSMUST00000038514 Exoc6bA6H5Z3 810 aa17.98■□□□□ 0.47
Nup54-201ENSMUST00000038514 1700006A11RikB9EHI3 544 aa17.98■□□□□ 0.47
Nup54-201ENSMUST00000038514 Wdr78E9PYY5 807 aa17.98■□□□□ 0.47
Nup54-201ENSMUST00000038514 Fam228bQ497Q6 232 aa17.98■□□□□ 0.47
Nup54-201ENSMUST00000038514 Amotl1Q9D4H4 968 aa17.98■□□□□ 0.47
Nup54-201ENSMUST00000038514 Nid2O88322 1403 aa17.98■□□□□ 0.47
Nup54-201ENSMUST00000038514 Atp10bB1AWN4 1474 aa17.98■□□□□ 0.47
Nup54-201ENSMUST00000038514 Mx2Q9WVP9 655 aa17.98■□□□□ 0.47
Nup54-201ENSMUST00000038514 Abcc12Q80WJ6 1366 aa17.98■□□□□ 0.47
Nup54-201ENSMUST00000038514 EappQ5BU09 281 aa17.97■□□□□ 0.47
Nup54-201ENSMUST00000038514 Ncbp1Q3UYV9 790 aaKnown RBP17.97■□□□□ 0.47
Nup54-201ENSMUST00000038514 Ifit2Q64112 472 aa17.97■□□□□ 0.47
Nup54-201ENSMUST00000038514 Tceal9Q9DD24 104 aa17.97■□□□□ 0.47
Nup54-201ENSMUST00000038514 Irx6Q9ER75 438 aa17.97■□□□□ 0.47
Nup54-201ENSMUST00000038514 Abcc4E9Q236 1325 aa17.97■□□□□ 0.47
Nup54-201ENSMUST00000038514 Kcnb2A6H8H5 907 aa17.96■□□□□ 0.47
Nup54-201ENSMUST00000038514 Cd22P35329 862 aa17.96■□□□□ 0.47
Nup54-201ENSMUST00000038514 Tgfb1i1Q62219 461 aa17.96■□□□□ 0.47
Nup54-201ENSMUST00000038514 Inpp5bQ8K337 993 aa17.96■□□□□ 0.47
Nup54-201ENSMUST00000038514 Taf5lQ91WQ5 589 aa17.96■□□□□ 0.47
Nup54-201ENSMUST00000038514 Nfat5Q9WV30 1534 aa17.96■□□□□ 0.47
Nup54-201ENSMUST00000038514 Kdm6aO70546 1401 aa17.96■□□□□ 0.47
Nup54-201ENSMUST00000038514 Pcmtd1P59913 357 aa17.96■□□□□ 0.47
Nup54-201ENSMUST00000038514 Wdr24Q8CFJ9 790 aa17.96■□□□□ 0.47
Nup54-201ENSMUST00000038514 Col1a2Q01149 1372 aa17.96■□□□□ 0.46
Nup54-201ENSMUST00000038514 Scaf1Q5U4C3 1256 aaKnown RBP17.95■□□□□ 0.46
Nup54-201ENSMUST00000038514 Cchcr1Q8K2I2 770 aa17.95■□□□□ 0.46
Nup54-201ENSMUST00000038514 Cfdp1O88271 295 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms