RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Ddx60E9PZQ1 1711 aa26.59■■□□□ 1.85
Ttc39b-201ENSMUST00000030205 Gja5Q01231 358 aa26.58■■□□□ 1.85
Ttc39b-201ENSMUST00000030205 Iqsec3Q3TES0 1195 aa26.58■■□□□ 1.85
Ttc39b-201ENSMUST00000030205 Pik3ap1Q9EQ32 811 aa26.58■■□□□ 1.85
Ttc39b-201ENSMUST00000030205 TefQ9JLC6 301 aa26.58■■□□□ 1.85
Ttc39b-201ENSMUST00000030205 Cers3Q1A3B0 383 aa26.57■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Esco1Q69Z69 843 aa26.57■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Prim1P20664 417 aa26.56■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Prkab2Q6PAM0 271 aa26.56■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Prr29B1ARI9 187 aa26.55■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Arid3aQ62431 601 aa26.55■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 UtrnE9Q6R7 3430 aa26.55■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Slf2Q6P9P0 1278 aa26.54■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Lama4P97927 1816 aa26.53■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Apaf1O88879 1249 aa26.53■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Ggnbp2Q5SV77 696 aa26.53■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 D830030K20RikE9PYQ5 218 aa26.52■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Gm3043K7N693 218 aa26.52■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Gm16440K7N6G6 218 aa26.52■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Gm2244L7N2A3 218 aa26.52■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Gm3278L7N2D2 218 aa26.52■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Gm8271L7N2E2 218 aa26.52■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Usp19Q3UJD6 1360 aa26.52■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Gjd4Q8BSD4 364 aa26.52■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Mapk8ip3Q9ESN9 1337 aa26.52■■□□□ 1.84
Ttc39b-201ENSMUST00000030205 Cd248Q91V98 765 aa26.51■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 Q7TT23 1179 aa26.5■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 Pdzph1Q8BGR1 1238 aa26.5■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 Spire2Q8K1S6 718 aa26.5■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 Mex3cQ05A36 652 aaKnown RBP26.49■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 Slc39a6Q8C145 765 aa26.49■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 Pdia6Q922R8 440 aaKnown RBP26.49■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 SowahdQ8BY98 327 aa26.48■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 Col1a2Q01149 1372 aa26.47■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 Unc5clQ6R653 518 aa26.47■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 CastP51125 788 aa26.46■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 XpcP51612 930 aa26.46■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 Bcl2l13P59017 434 aa26.46■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 NgdnQ9DB96 315 aaKnown RBP26.46■■□□□ 1.83
Ttc39b-201ENSMUST00000030205 Kif13bA0A286YCV9 1847 aa26.45■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Eif4a1P60843 406 aaKnown RBP26.45■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Anp32bQ9EST5 272 aaKnown RBP26.45■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Col5a2Q3U962 1497 aa26.44■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Ifit1bl2Q3U687 466 aa26.44■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Ptcd1Q8C2E4 695 aaKnown RBP26.44■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 St5Q924W7 1134 aa26.44■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Upf1Q9EPU0 1124 aaKnown RBP26.44■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Golgb1E9PVZ8 3238 aa26.44■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Hoxd11P23813 323 aa26.43■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Socs7Q8VHQ2 579 aa26.43■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 CfhP06909 1234 aa26.42■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 GckrQ91X44 587 aa26.42■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Cyp2c23E9Q5K4 494 aa26.41■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Atf5O70191 283 aa26.41■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 PgfP49764 158 aa26.41■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Rpgrip1lQ8CG73 1264 aa26.41■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Taf7Q9R1C0 341 aa26.41■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Col24a1Q30D77 1733 aa26.4■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Tnnt1O88346 262 aa26.4■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Uhrf1bp1B2KF50 1429 aa26.39■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Mrc1Q61830 1456 aa26.39■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Cyp2d12Q8BVD2 504 aa26.39■■□□□ 1.82
Ttc39b-201ENSMUST00000030205 Stox1B2RQL2 990 aa26.38■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 NpcdF8VQB8 469 aa26.38■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 CltaO08585 235 aa26.38■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Olfr247E9PVJ7 320 aa26.37■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Olfr819K7N727 320 aa26.37■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Fkbp4P30416 458 aa26.37■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Aebp2Q9Z248 504 aaKnown RBP26.37■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Duox1A2AQ92 1551 aa26.37■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Ssc5dQ8BV57 1371 aa26.36■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Pde4bB1AWC9 736 aa26.36■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Stxbp5lQ5DQR4 1185 aa26.36■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Stk32bQ9JJX8 414 aa26.36■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Znf541Q0GGX2 1363 aa26.35■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Cavin4A2AMM0 362 aa26.35■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Fhdc1Q3ULZ2 1149 aa26.35■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Nlrp3Q8R4B8 1033 aa26.35■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Senp3Q9EP97 568 aaKnown RBP26.35■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Mapk8ip1Q9WVI9 707 aa26.35■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Pibf1E9Q6K3 756 aa26.34■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Adam1aQ60813 791 aa26.34■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Dbndd1Q9CZ00 160 aa26.34■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Foxp4Q9DBY0 795 aaKnown RBP26.34■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Dctn1O08788 1281 aa26.33■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Gja3Q64448 417 aa26.33■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Setdb1O88974 1307 aa26.33■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Erbb4Q61527 1308 aa26.33■■□□□ 1.81
Ttc39b-201ENSMUST00000030205 Npy5rO70342 466 aa26.32■■□□□ 1.8
Ttc39b-201ENSMUST00000030205 SobpQ0P5V2 864 aa26.32■■□□□ 1.8
Ttc39b-201ENSMUST00000030205 Zc3h12cQ5DTV4 884 aa26.32■■□□□ 1.8
Ttc39b-201ENSMUST00000030205 Gimap8Q75N62 688 aa26.32■■□□□ 1.8
Ttc39b-201ENSMUST00000030205 Swt1Q9DBQ9 907 aa26.32■■□□□ 1.8
Ttc39b-201ENSMUST00000030205 Mtcl1Q3UHU5 1945 aa26.31■■□□□ 1.8
Ttc39b-201ENSMUST00000030205 Rbm46P86049 533 aa26.31■■□□□ 1.8
Ttc39b-201ENSMUST00000030205 Thrap3Q569Z6 951 aaKnown RBP26.31■■□□□ 1.8
Ttc39b-201ENSMUST00000030205 Znf428Q8C1M2 176 aa26.31■■□□□ 1.8
Ttc39b-201ENSMUST00000030205 Trim52Q8CDV4 233 aa26.31■■□□□ 1.8
Ttc39b-201ENSMUST00000030205 Ptf1aQ9QX98 324 aa26.31■■□□□ 1.8
Ttc39b-201ENSMUST00000030205 Atf7ipQ7TT18 1306 aa26.31■■□□□ 1.8
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms