RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

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Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Gm35339A0A140LHH9 1649 aa47,31■■■■■ 5,16
Ttc39b-201ENSMUST00000030205 NischQ80TM9 1593 aa46,44■■■■■ 5,03
Ttc39b-201ENSMUST00000030205 Abcc8B2RUS7 1588 aa45,1■■■■■ 4,81
Ttc39b-201ENSMUST00000030205 Abcc9P70170 1546 aa44,88■■■■■ 4,78
Ttc39b-201ENSMUST00000030205 ScribQ80U72 1612 aa43,87■■■■■ 4,61
Ttc39b-201ENSMUST00000030205 NacadQ5SWP3 1504 aa42,36■■■■■ 4,37
Ttc39b-201ENSMUST00000030205 Kdm5dQ62240 1548 aa42,26■■■■■ 4,36
Ttc39b-201ENSMUST00000030205 Sycp2Q9CUU3 1500 aa41,59■■■■■ 4,25
Ttc39b-201ENSMUST00000030205 Dcaf1Q80TR8 1506 aa41,33■■■■■ 4,21
Ttc39b-201ENSMUST00000030205 BicraF8VPZ9 1578 aa41,14■■■■■ 4,18
Ttc39b-201ENSMUST00000030205 Dnajc5bQ9CQ94 199 aa40,96■■■■■ 4,15
Ttc39b-201ENSMUST00000030205 Rb1cc1Q9ESK9 1588 aa40,42■■■■■ 4,06
Ttc39b-201ENSMUST00000030205 Pds5bQ4VA53 1446 aaKnown RBP40,07■■■■■ 4
Ttc39b-201ENSMUST00000030205 Thoc2B1AZI6 1594 aaKnown RBP39,99■■■■□ 3,99
Ttc39b-201ENSMUST00000030205 Baz1aO88379 1555 aa39,8■■■■□ 3,96
Ttc39b-201ENSMUST00000030205 Crybg2B7ZCC2 1516 aa39,73■■■■□ 3,95
Ttc39b-201ENSMUST00000030205 Ccdc180J3QNE4 1664 aa39,65■■■■□ 3,94
Ttc39b-201ENSMUST00000030205 Atad2bE9Q166 1460 aaKnown RBP39,56■■■■□ 3,92
Ttc39b-201ENSMUST00000030205 Rhox8Q6VSS7 320 aa39,5■■■■□ 3,91
Ttc39b-201ENSMUST00000030205 Zcchc6Q5BLK4 1491 aaKnown RBP39,34■■■■□ 3,89
Ttc39b-201ENSMUST00000030205 Cc2d2aQ8CFW7 1633 aa39,31■■■■□ 3,88
Ttc39b-201ENSMUST00000030205 Ercc6F8VPZ5 1481 aa39,18■■■■□ 3,86
Ttc39b-201ENSMUST00000030205 Smarca2Q6DIC0 1577 aa39,06■■■■□ 3,84
Ttc39b-201ENSMUST00000030205 Smarca4Q3TKT4 1613 aaKnown RBP39■■■■□ 3,83
Ttc39b-201ENSMUST00000030205 Fam135aQ6NS59 1506 aa38,94■■■■□ 3,82
Ttc39b-201ENSMUST00000030205 Iqgap2Q3UQ44 1575 aa38,88■■■■□ 3,81
Ttc39b-201ENSMUST00000030205 Cecr2E9Q2Z1 1453 aa38,77■■■■□ 3,8
Ttc39b-201ENSMUST00000030205 Wdr62Q3U3T8 1523 aa38,66■■■■□ 3,78
Ttc39b-201ENSMUST00000030205 Frmpd1A2AKB4 1549 aa38,62■■■■□ 3,77
Ttc39b-201ENSMUST00000030205 Phldb1Q6PDH0 1371 aaKnown RBP38,53■■■■□ 3,76
Ttc39b-201ENSMUST00000030205 Baz1bQ9Z277 1479 aa38,42■■■■□ 3,74
Ttc39b-201ENSMUST00000030205 Ubl4bQ9CQ84 188 aa38,21■■■■□ 3,71
Ttc39b-201ENSMUST00000030205 Unc13aQ4KUS2 1712 aa38,05■■■■□ 3,68
Ttc39b-201ENSMUST00000030205 Mrc2Q64449 1479 aa38,03■■■■□ 3,68
Ttc39b-201ENSMUST00000030205 CftrP26361 1476 aa37,75■■■■□ 3,63
Ttc39b-201ENSMUST00000030205 Cttnbp2B9EJA2 1648 aa37,68■■■■□ 3,62
Ttc39b-201ENSMUST00000030205 Dnajc5P60904 198 aa37,62■■■■□ 3,61
Ttc39b-201ENSMUST00000030205 Synj1Q8CHC4 1574 aa37,6■■■■□ 3,61
Ttc39b-201ENSMUST00000030205 Trim41Q5NCC3 630 aa37,44■■■■□ 3,58
Ttc39b-201ENSMUST00000030205 Brd4Q9ESU6 1400 aaKnown RBP37,44■■■■□ 3,58
Ttc39b-201ENSMUST00000030205 Rtl1Q7M732 1744 aa37,36■■■■□ 3,57
Ttc39b-201ENSMUST00000030205 Lrriq1Q0P5X1 1673 aa37,25■■■■□ 3,55
Ttc39b-201ENSMUST00000030205 Cux2P70298 1426 aa37,14■■■■□ 3,54
Ttc39b-201ENSMUST00000030205 Ccdc136Q3TVA9 1136 aa37,12■■■■□ 3,53
Ttc39b-201ENSMUST00000030205 Rsf1E9PWW9 1441 aaKnown RBP37,06■■■■□ 3,52
Ttc39b-201ENSMUST00000030205 Kif15Q6P9L6 1387 aa37,03■■■■□ 3,52
Ttc39b-201ENSMUST00000030205 Esf1Q3V1V3 845 aaKnown RBP37■■■■□ 3,51
Ttc39b-201ENSMUST00000030205 Kif21aQ9QXL2 1672 aa36,99■■■■□ 3,51
Ttc39b-201ENSMUST00000030205 Lamc3Q9R0B6 1581 aa36,77■■■■□ 3,48
Ttc39b-201ENSMUST00000030205 Eif4g3Q80XI3 1579 aaKnown RBP36,7■■■■□ 3,46
Ttc39b-201ENSMUST00000030205 Npm1Q61937 292 aaKnown RBP36,68■■■■□ 3,46
Ttc39b-201ENSMUST00000030205 Shroom2A2ALU4 1481 aa36,61■■■■□ 3,45
Ttc39b-201ENSMUST00000030205 Cep164Q5DU05 1446 aa36,51■■■■□ 3,44
Ttc39b-201ENSMUST00000030205 Urb2E9Q7L1 1524 aaKnown RBP36,41■■■■□ 3,42
Ttc39b-201ENSMUST00000030205 Plb1Q3TTY0 1478 aa36,32■■■■□ 3,41
Ttc39b-201ENSMUST00000030205 Dhx29Q6PGC1 1365 aaKnown RBP36,32■■■■□ 3,4
Ttc39b-201ENSMUST00000030205 Col17a1Q07563 1470 aa36,24■■■■□ 3,39
Ttc39b-201ENSMUST00000030205 Ccdc18Q640L5 1455 aa36,2■■■■□ 3,39
Ttc39b-201ENSMUST00000030205 Il27Q8K3I6 234 aa36,19■■■■□ 3,38
Ttc39b-201ENSMUST00000030205 TnnQ80Z71 1560 aa36,18■■■■□ 3,38
Ttc39b-201ENSMUST00000030205 LrpprcQ6PB66 1392 aaKnown RBP36,15■■■■□ 3,38
Ttc39b-201ENSMUST00000030205 Pabpn1Q8CCS6 302 aaKnown RBP36,12■■■■□ 3,37
Ttc39b-201ENSMUST00000030205 Crocc2F6XLV1 1638 aa36,11■■■■□ 3,37
Ttc39b-201ENSMUST00000030205 Top2bQ64511 1612 aa36,05■■■■□ 3,36
Ttc39b-201ENSMUST00000030205 Camsap1A2AHC3 1581 aa36,05■■■■□ 3,36
Ttc39b-201ENSMUST00000030205 Rusc2Q80U22 1514 aa35,95■■■■□ 3,35
Ttc39b-201ENSMUST00000030205 Ift140E9PY46 1464 aa35,94■■■■□ 3,34
Ttc39b-201ENSMUST00000030205 Golga3P55937 1487 aa35,91■■■■□ 3,34
Ttc39b-201ENSMUST00000030205 PogzQ8BZH4 1409 aaKnown RBP35,89■■■■□ 3,34
Ttc39b-201ENSMUST00000030205 Pelp1Q9DBD5 1123 aaKnown RBP35,83■■■■□ 3,33
Ttc39b-201ENSMUST00000030205 Cngb1E1AZ71 1325 aa35,77■■■■□ 3,32
Ttc39b-201ENSMUST00000030205 Duox2A2AQ99 1517 aa35,7■■■■□ 3,31
Ttc39b-201ENSMUST00000030205 Zcchc11B2RX14 1644 aaKnown RBP35,69■■■■□ 3,3
Ttc39b-201ENSMUST00000030205 Fmn1Q05860 1466 aa35,63■■■■□ 3,29
Ttc39b-201ENSMUST00000030205 Disp1Q3TDN0 1521 aa35,62■■■■□ 3,29
Ttc39b-201ENSMUST00000030205 Grin2bQ01097 1482 aa35,51■■■■□ 3,28
Ttc39b-201ENSMUST00000030205 Nup160Q9Z0W3 1402 aaKnown RBP35,48■■■■□ 3,27
Ttc39b-201ENSMUST00000030205 Cc2d2bA0A286YDU8 1405 aa35,44■■■■□ 3,26
Ttc39b-201ENSMUST00000030205 Samd9lQ69Z37 1561 aa35,43■■■■□ 3,26
Ttc39b-201ENSMUST00000030205 Setd1bQ8CFT2 1985 aa35,43■■■■□ 3,26
Ttc39b-201ENSMUST00000030205 Pbrm1Q8BSQ9 1634 aaKnown RBP35,4■■■■□ 3,26
Ttc39b-201ENSMUST00000030205 Efcab5A0JP43 1406 aa35,3■■■■□ 3,24
Ttc39b-201ENSMUST00000030205 Adgrl3Q80TS3 1537 aa35,26■■■■□ 3,23
Ttc39b-201ENSMUST00000030205 Rad54l2Q99NG0 1466 aa35,21■■■■□ 3,23
Ttc39b-201ENSMUST00000030205 Pcdh10E9PXQ7 1057 aa35,19■■■■□ 3,22
Ttc39b-201ENSMUST00000030205 PtprkP35822 1457 aa35,17■■■■□ 3,22
Ttc39b-201ENSMUST00000030205 AqrQ8CFQ3 1481 aaKnown RBP35,16■■■■□ 3,22
Ttc39b-201ENSMUST00000030205 Fgd6Q69ZL1 1399 aa35,16■■■■□ 3,22
Ttc39b-201ENSMUST00000030205 Arhgef5E9Q7D5 1581 aa35,16■■■■□ 3,22
Ttc39b-201ENSMUST00000030205 Grin2aP35436 1464 aa35,16■■■■□ 3,22
Ttc39b-201ENSMUST00000030205 Magi3Q9EQJ9 1476 aa35,13■■■■□ 3,21
Ttc39b-201ENSMUST00000030205 Cep170Q6A065 1588 aa35,13■■■■□ 3,21
Ttc39b-201ENSMUST00000030205 Gapvd1Q6PAR5 1458 aa35,1■■■■□ 3,21
Ttc39b-201ENSMUST00000030205 Gm156Q58A37 223 aa35,07■■■■□ 3,2
Ttc39b-201ENSMUST00000030205 Ttbk1Q6PCN3 1308 aa35,03■■■■□ 3,2
Ttc39b-201ENSMUST00000030205 PtprtQ99M80 1454 aa34,97■■■■□ 3,19
Ttc39b-201ENSMUST00000030205 NrkQ9R0G8 1455 aa34,94■■■■□ 3,18
Ttc39b-201ENSMUST00000030205 AknaQ80VW7 1404 aa34,9■■■■□ 3,18
Ttc39b-201ENSMUST00000030205 Abcc1O35379 1528 aa34,88■■■■□ 3,17
Ttc39b-201ENSMUST00000030205 Pla2r1Q62028 1487 aa34,86■■■■□ 3,17
Retrieved 100 of 22,080 RNA–protein pairs in 53,5 ms