RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Gm35339A0A140LHH9 1649 aa47.31■■■■■ 5.16
Ttc39b-201ENSMUST00000030205 NischQ80TM9 1593 aa46.44■■■■■ 5.03
Ttc39b-201ENSMUST00000030205 Abcc8B2RUS7 1588 aa45.1■■■■■ 4.81
Ttc39b-201ENSMUST00000030205 Abcc9P70170 1546 aa44.88■■■■■ 4.78
Ttc39b-201ENSMUST00000030205 ScribQ80U72 1612 aa43.87■■■■■ 4.61
Ttc39b-201ENSMUST00000030205 NacadQ5SWP3 1504 aa42.36■■■■■ 4.37
Ttc39b-201ENSMUST00000030205 Kdm5dQ62240 1548 aa42.26■■■■■ 4.36
Ttc39b-201ENSMUST00000030205 Sycp2Q9CUU3 1500 aa41.59■■■■■ 4.25
Ttc39b-201ENSMUST00000030205 Dcaf1Q80TR8 1506 aa41.33■■■■■ 4.21
Ttc39b-201ENSMUST00000030205 BicraF8VPZ9 1578 aa41.14■■■■■ 4.18
Ttc39b-201ENSMUST00000030205 Dnajc5bQ9CQ94 199 aa40.96■■■■■ 4.15
Ttc39b-201ENSMUST00000030205 Rb1cc1Q9ESK9 1588 aa40.42■■■■■ 4.06
Ttc39b-201ENSMUST00000030205 Pds5bQ4VA53 1446 aaKnown RBP40.07■■■■■ 4
Ttc39b-201ENSMUST00000030205 Thoc2B1AZI6 1594 aaKnown RBP39.99■■■■□ 3.99
Ttc39b-201ENSMUST00000030205 Baz1aO88379 1555 aa39.8■■■■□ 3.96
Ttc39b-201ENSMUST00000030205 Crybg2B7ZCC2 1516 aa39.73■■■■□ 3.95
Ttc39b-201ENSMUST00000030205 Ccdc180J3QNE4 1664 aa39.65■■■■□ 3.94
Ttc39b-201ENSMUST00000030205 Atad2bE9Q166 1460 aaKnown RBP39.56■■■■□ 3.92
Ttc39b-201ENSMUST00000030205 Rhox8Q6VSS7 320 aa39.5■■■■□ 3.91
Ttc39b-201ENSMUST00000030205 Zcchc6Q5BLK4 1491 aaKnown RBP39.34■■■■□ 3.89
Ttc39b-201ENSMUST00000030205 Cc2d2aQ8CFW7 1633 aa39.31■■■■□ 3.88
Ttc39b-201ENSMUST00000030205 Ercc6F8VPZ5 1481 aa39.18■■■■□ 3.86
Ttc39b-201ENSMUST00000030205 Smarca2Q6DIC0 1577 aa39.06■■■■□ 3.84
Ttc39b-201ENSMUST00000030205 Smarca4Q3TKT4 1613 aaKnown RBP39■■■■□ 3.83
Ttc39b-201ENSMUST00000030205 Fam135aQ6NS59 1506 aa38.94■■■■□ 3.82
Ttc39b-201ENSMUST00000030205 Iqgap2Q3UQ44 1575 aa38.88■■■■□ 3.81
Ttc39b-201ENSMUST00000030205 Cecr2E9Q2Z1 1453 aa38.77■■■■□ 3.8
Ttc39b-201ENSMUST00000030205 Wdr62Q3U3T8 1523 aa38.66■■■■□ 3.78
Ttc39b-201ENSMUST00000030205 Frmpd1A2AKB4 1549 aa38.62■■■■□ 3.77
Ttc39b-201ENSMUST00000030205 Phldb1Q6PDH0 1371 aaKnown RBP38.53■■■■□ 3.76
Ttc39b-201ENSMUST00000030205 Baz1bQ9Z277 1479 aa38.42■■■■□ 3.74
Ttc39b-201ENSMUST00000030205 Ubl4bQ9CQ84 188 aa38.21■■■■□ 3.71
Ttc39b-201ENSMUST00000030205 Unc13aQ4KUS2 1712 aa38.05■■■■□ 3.68
Ttc39b-201ENSMUST00000030205 Mrc2Q64449 1479 aa38.03■■■■□ 3.68
Ttc39b-201ENSMUST00000030205 CftrP26361 1476 aa37.75■■■■□ 3.63
Ttc39b-201ENSMUST00000030205 Cttnbp2B9EJA2 1648 aa37.68■■■■□ 3.62
Ttc39b-201ENSMUST00000030205 Dnajc5P60904 198 aa37.62■■■■□ 3.61
Ttc39b-201ENSMUST00000030205 Synj1Q8CHC4 1574 aa37.6■■■■□ 3.61
Ttc39b-201ENSMUST00000030205 Trim41Q5NCC3 630 aa37.44■■■■□ 3.58
Ttc39b-201ENSMUST00000030205 Brd4Q9ESU6 1400 aaKnown RBP37.44■■■■□ 3.58
Ttc39b-201ENSMUST00000030205 Rtl1Q7M732 1744 aa37.36■■■■□ 3.57
Ttc39b-201ENSMUST00000030205 Lrriq1Q0P5X1 1673 aa37.25■■■■□ 3.55
Ttc39b-201ENSMUST00000030205 Cux2P70298 1426 aa37.14■■■■□ 3.54
Ttc39b-201ENSMUST00000030205 Ccdc136Q3TVA9 1136 aa37.12■■■■□ 3.53
Ttc39b-201ENSMUST00000030205 Rsf1E9PWW9 1441 aaKnown RBP37.06■■■■□ 3.52
Ttc39b-201ENSMUST00000030205 Kif15Q6P9L6 1387 aa37.03■■■■□ 3.52
Ttc39b-201ENSMUST00000030205 Esf1Q3V1V3 845 aaKnown RBP37■■■■□ 3.51
Ttc39b-201ENSMUST00000030205 Kif21aQ9QXL2 1672 aa36.99■■■■□ 3.51
Ttc39b-201ENSMUST00000030205 Lamc3Q9R0B6 1581 aa36.77■■■■□ 3.48
Ttc39b-201ENSMUST00000030205 Eif4g3Q80XI3 1579 aaKnown RBP36.7■■■■□ 3.46
Ttc39b-201ENSMUST00000030205 Npm1Q61937 292 aaKnown RBP36.68■■■■□ 3.46
Ttc39b-201ENSMUST00000030205 Shroom2A2ALU4 1481 aa36.61■■■■□ 3.45
Ttc39b-201ENSMUST00000030205 Cep164Q5DU05 1446 aa36.51■■■■□ 3.44
Ttc39b-201ENSMUST00000030205 Urb2E9Q7L1 1524 aaKnown RBP36.41■■■■□ 3.42
Ttc39b-201ENSMUST00000030205 Plb1Q3TTY0 1478 aa36.32■■■■□ 3.41
Ttc39b-201ENSMUST00000030205 Dhx29Q6PGC1 1365 aaKnown RBP36.32■■■■□ 3.4
Ttc39b-201ENSMUST00000030205 Col17a1Q07563 1470 aa36.24■■■■□ 3.39
Ttc39b-201ENSMUST00000030205 Ccdc18Q640L5 1455 aa36.2■■■■□ 3.39
Ttc39b-201ENSMUST00000030205 Il27Q8K3I6 234 aa36.19■■■■□ 3.38
Ttc39b-201ENSMUST00000030205 TnnQ80Z71 1560 aa36.18■■■■□ 3.38
Ttc39b-201ENSMUST00000030205 LrpprcQ6PB66 1392 aaKnown RBP36.15■■■■□ 3.38
Ttc39b-201ENSMUST00000030205 Pabpn1Q8CCS6 302 aaKnown RBP36.12■■■■□ 3.37
Ttc39b-201ENSMUST00000030205 Crocc2F6XLV1 1638 aa36.11■■■■□ 3.37
Ttc39b-201ENSMUST00000030205 Top2bQ64511 1612 aa36.05■■■■□ 3.36
Ttc39b-201ENSMUST00000030205 Camsap1A2AHC3 1581 aa36.05■■■■□ 3.36
Ttc39b-201ENSMUST00000030205 Rusc2Q80U22 1514 aa35.95■■■■□ 3.35
Ttc39b-201ENSMUST00000030205 Ift140E9PY46 1464 aa35.94■■■■□ 3.34
Ttc39b-201ENSMUST00000030205 Golga3P55937 1487 aa35.91■■■■□ 3.34
Ttc39b-201ENSMUST00000030205 PogzQ8BZH4 1409 aaKnown RBP35.89■■■■□ 3.34
Ttc39b-201ENSMUST00000030205 Pelp1Q9DBD5 1123 aaKnown RBP35.83■■■■□ 3.33
Ttc39b-201ENSMUST00000030205 Cngb1E1AZ71 1325 aa35.77■■■■□ 3.32
Ttc39b-201ENSMUST00000030205 Duox2A2AQ99 1517 aa35.7■■■■□ 3.31
Ttc39b-201ENSMUST00000030205 Zcchc11B2RX14 1644 aaKnown RBP35.69■■■■□ 3.3
Ttc39b-201ENSMUST00000030205 Fmn1Q05860 1466 aa35.63■■■■□ 3.29
Ttc39b-201ENSMUST00000030205 Disp1Q3TDN0 1521 aa35.62■■■■□ 3.29
Ttc39b-201ENSMUST00000030205 Grin2bQ01097 1482 aa35.51■■■■□ 3.28
Ttc39b-201ENSMUST00000030205 Nup160Q9Z0W3 1402 aaKnown RBP35.48■■■■□ 3.27
Ttc39b-201ENSMUST00000030205 Cc2d2bA0A286YDU8 1405 aa35.44■■■■□ 3.26
Ttc39b-201ENSMUST00000030205 Samd9lQ69Z37 1561 aa35.43■■■■□ 3.26
Ttc39b-201ENSMUST00000030205 Setd1bQ8CFT2 1985 aa35.43■■■■□ 3.26
Ttc39b-201ENSMUST00000030205 Pbrm1Q8BSQ9 1634 aaKnown RBP35.4■■■■□ 3.26
Ttc39b-201ENSMUST00000030205 Efcab5A0JP43 1406 aa35.3■■■■□ 3.24
Ttc39b-201ENSMUST00000030205 Adgrl3Q80TS3 1537 aa35.26■■■■□ 3.23
Ttc39b-201ENSMUST00000030205 Rad54l2Q99NG0 1466 aa35.21■■■■□ 3.23
Ttc39b-201ENSMUST00000030205 Pcdh10E9PXQ7 1057 aa35.19■■■■□ 3.22
Ttc39b-201ENSMUST00000030205 PtprkP35822 1457 aa35.17■■■■□ 3.22
Ttc39b-201ENSMUST00000030205 AqrQ8CFQ3 1481 aaKnown RBP35.16■■■■□ 3.22
Ttc39b-201ENSMUST00000030205 Fgd6Q69ZL1 1399 aa35.16■■■■□ 3.22
Ttc39b-201ENSMUST00000030205 Arhgef5E9Q7D5 1581 aa35.16■■■■□ 3.22
Ttc39b-201ENSMUST00000030205 Grin2aP35436 1464 aa35.16■■■■□ 3.22
Ttc39b-201ENSMUST00000030205 Magi3Q9EQJ9 1476 aa35.13■■■■□ 3.21
Ttc39b-201ENSMUST00000030205 Cep170Q6A065 1588 aa35.13■■■■□ 3.21
Ttc39b-201ENSMUST00000030205 Gapvd1Q6PAR5 1458 aa35.1■■■■□ 3.21
Ttc39b-201ENSMUST00000030205 Gm156Q58A37 223 aa35.07■■■■□ 3.2
Ttc39b-201ENSMUST00000030205 Ttbk1Q6PCN3 1308 aa35.03■■■■□ 3.2
Ttc39b-201ENSMUST00000030205 PtprtQ99M80 1454 aa34.97■■■■□ 3.19
Ttc39b-201ENSMUST00000030205 NrkQ9R0G8 1455 aa34.94■■■■□ 3.18
Ttc39b-201ENSMUST00000030205 AknaQ80VW7 1404 aa34.9■■■■□ 3.18
Ttc39b-201ENSMUST00000030205 Abcc1O35379 1528 aa34.88■■■■□ 3.17
Ttc39b-201ENSMUST00000030205 Pla2r1Q62028 1487 aa34.86■■■■□ 3.17
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms