RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Ankib1Q6ZPS6 1085 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Ssh1Q76I79 1042 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Brf1Q8CFK2 676 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Pym1Q8CHP5 203 aaKnown RBP6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Ppp1r42Q8R1Z4 357 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 ApobrQ8VBT6 942 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Mrpl44Q9CY73 333 aaKnown RBP6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Kiaa1524Q8BWY9 907 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Krt79Q8VED5 531 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Rdm1Q9CQK3 281 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Bloc1s2Q9CWG9 143 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Bcl2l13P59017 434 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Tbc1d32Q3URV1 1296 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Fam193aQ8CGI1 1231 aaKnown RBP6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Tbc1d8bA3KGB4 1114 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Astn2Q80Z10 1352 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Spty2d1Q68FG3 682 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Mrvi1Q9WUX5 899 aaKnown RBP6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Trim55G3X8Y1 545 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Txndc16Q7TN22 820 aa6.4□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Ces1aE9PYP1 563 aa6.4□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Nucb2P81117 420 aa6.4□□□□□ -1.39
Vps13d-201ENSMUST00000020441 ItpripQ3TNL8 555 aa6.4□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Uspl1Q3ULM6 1089 aa6.4□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Cul5Q9D5V5 780 aa6.4□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Srgap1Q91Z69 1062 aa6.4□□□□□ -1.39
Vps13d-201ENSMUST00000020441 PtprkP35822 1457 aa6.4□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Tubb2aQ7TMM9 445 aa6.4□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Tubb2bQ9CWF2 445 aa6.4□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Amotl1Q9D4H4 968 aa6.4□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Taf7Q9R1C0 341 aa6.4□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Ccdc112A0AUP1 442 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Calm1P0DP26 149 aaKnown RBP6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Calm2P0DP27 149 aaKnown RBP6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Calm3P0DP28 149 aaKnown RBP6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Lamb3Q61087 1168 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Brd3Q8K2F0 726 aaKnown RBP6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Fam13bQ8K2H3 851 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Skap1Q3UUV5 355 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Nol7Q9D7Z3 254 aaKnown RBP6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 LifrP42703 1092 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Gbp4Q61107 620 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 IkQ9Z1M8 557 aaKnown RBP6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Tmc2Q8R4P4 888 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Lcmt1A0A0U1RNF2 332 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Maats1Q8BRC6 783 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Znf335A2A5K6 1337 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Ppp1r9bQ6R891 817 aaKnown RBP6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Shtn1Q8K2Q9 631 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Pip4k2bQ80XI4 416 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Klc3Q91W40 508 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Gjb2Q00977 226 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Luzp1Q8R4U7 1068 aaKnown RBP6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Atp10dQ8K2X1 1416 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Tmed8Q3UHI4 326 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Chrna2Q91X60 512 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Stx6Q9JKK1 255 aa6.39□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Senp1P59110 640 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 HomezQ80W88 542 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Gtpbp4Q99ME9 634 aaKnown RBP6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Talpid3E9PV87 1520 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Adgrl2Q8JZZ7 1487 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Atp8b3Q6UQ17 1335 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Ccdc121E9Q6D3 323 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 GpkowQ56A08 488 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Smc1bQ920F6 1248 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 AdnpQ9Z103 1108 aaKnown RBP6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Ktn1Q61595 1327 aaKnown RBP6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Rbm33Q9CXK9 1231 aaKnown RBP6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Wdr63B2RY71 923 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Exoc5Q3TPX4 708 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Neo1P97798 1493 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Naip5Q9R016 1403 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Usp5P56399 858 aaKnown RBP6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Fam160b2Q80YR2 744 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 SfpqQ8VIJ6 699 aaKnown RBP6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Pkd2l2Q9JLG4 621 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Farp2Q91VS8 1065 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Galntl5Q9D4M9 431 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Myo1bP46735 1107 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Pdia4P08003 638 aaKnown RBP6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 IqcgQ80W32 419 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Emilin2Q8K482 1074 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Ginm1Q91WR6 327 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 4931400O07RikQ9D4M5 137 aa6.38□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Zfp853A0A1D5RM95 733 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Zkscan7E9PVW1 718 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Gimap8Q75N62 688 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Ddx10Q80Y44 875 aaKnown RBP6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Mx2Q9WVP9 655 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Naip6Q9JIB6 1403 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Ggnbp2Q5SV77 696 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Jade2Q6ZQF7 829 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Cpsf1Q9EPU4 1441 aaKnown RBP6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Ccdc42Q5SV66 316 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Ppp2r5bQ6PD28 497 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Gpatch8A2A6A1 1505 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Fbln2P37889 1221 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Hook2Q7TMK6 716 aa6.37□□□□□ -1.39
Vps13d-201ENSMUST00000020441 Slc5a4bQ91ZP4 660 aa6.37□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms