RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Rhox8Q6VSS7 320 aa9,53□□□□□ -0,88
Vps13d-201ENSMUST00000020441 Rpgrip1Q9EPQ2 1331 aa9,14□□□□□ -0,95
Vps13d-201ENSMUST00000020441 Cngb1E1AZ71 1325 aa8,77□□□□□ -1,01
Vps13d-201ENSMUST00000020441 Trim41Q5NCC3 630 aa8,66□□□□□ -1,02
Vps13d-201ENSMUST00000020441 Las1lA2BE28 776 aaKnown RBP8,64□□□□□ -1,03
Vps13d-201ENSMUST00000020441 NischQ80TM9 1593 aa8,57□□□□□ -1,04
Vps13d-201ENSMUST00000020441 Pelp1Q9DBD5 1123 aaKnown RBP8,56□□□□□ -1,04
Vps13d-201ENSMUST00000020441 Esf1Q3V1V3 845 aaKnown RBP8,56□□□□□ -1,04
Vps13d-201ENSMUST00000020441 Rtl1Q7M732 1744 aa8,43□□□□□ -1,06
Vps13d-201ENSMUST00000020441 Ccdc136Q3TVA9 1136 aa8,42□□□□□ -1,06
Vps13d-201ENSMUST00000020441 Ccdc180J3QNE4 1664 aa8,36□□□□□ -1,07
Vps13d-201ENSMUST00000020441 Stra8P70278 393 aa8,35□□□□□ -1,07
Vps13d-201ENSMUST00000020441 NefmP08553 848 aa8,34□□□□□ -1,07
Vps13d-201ENSMUST00000020441 Npm2Q80W85 207 aa8,32□□□□□ -1,08
Vps13d-201ENSMUST00000020441 HrcG5E8J6 738 aa8,32□□□□□ -1,08
Vps13d-201ENSMUST00000020441 Ube2uB1AUC4 352 aa8,32□□□□□ -1,08
Vps13d-201ENSMUST00000020441 Zeb1Q64318 1117 aa8,29□□□□□ -1,08
Vps13d-201ENSMUST00000020441 Wdr66E9Q743 1299 aa8,26□□□□□ -1,09
Vps13d-201ENSMUST00000020441 Acin1Q9JIX8 1338 aaKnown RBP8,17□□□□□ -1,1
Vps13d-201ENSMUST00000020441 Gab3Q8BSM5 595 aa8,15□□□□□ -1,1
Vps13d-201ENSMUST00000020441 Ehmt2Q9Z148 1263 aaKnown RBP8,15□□□□□ -1,11
Vps13d-201ENSMUST00000020441 Myt1lP97500 1187 aa8,14□□□□□ -1,11
Vps13d-201ENSMUST00000020441 CenpbP27790 599 aa8,09□□□□□ -1,11
Vps13d-201ENSMUST00000020441 Myt1Q8CFC2 1127 aa8,07□□□□□ -1,12
Vps13d-201ENSMUST00000020441 Anp32bQ9EST5 272 aaKnown RBP8,06□□□□□ -1,12
Vps13d-201ENSMUST00000020441 Tnnt3Q9QZ47 272 aa8,03□□□□□ -1,12
Vps13d-201ENSMUST00000020441 UbtfP25976 765 aaKnown RBP7,99□□□□□ -1,13
Vps13d-201ENSMUST00000020441 Hdac5Q9Z2V6 1113 aa7,98□□□□□ -1,13
Vps13d-201ENSMUST00000020441 Abcc9P70170 1546 aa7,96□□□□□ -1,14
Vps13d-201ENSMUST00000020441 Cdk11bP24788 784 aaKnown RBP7,92□□□□□ -1,14
Vps13d-201ENSMUST00000020441 NrdcQ8BHG1 1161 aa7,92□□□□□ -1,14
Vps13d-201ENSMUST00000020441 NeflP08551 543 aa7,91□□□□□ -1,14
Vps13d-201ENSMUST00000020441 Rtl5Q5DTT4 599 aa7,89□□□□□ -1,15
Vps13d-201ENSMUST00000020441 Neurod1Q60867 357 aa7,89□□□□□ -1,15
Vps13d-201ENSMUST00000020441 NclP09405 707 aaKnown RBP7,88□□□□□ -1,15
Vps13d-201ENSMUST00000020441 Zcchc6Q5BLK4 1491 aaKnown RBP7,87□□□□□ -1,15
Vps13d-201ENSMUST00000020441 Il27Q8K3I6 234 aa7,82□□□□□ -1,16
Vps13d-201ENSMUST00000020441 4930567H17RikQ3V0K5 233 aa7,81□□□□□ -1,16
Vps13d-201ENSMUST00000020441 Npm1Q61937 292 aaKnown RBP7,79□□□□□ -1,16
Vps13d-201ENSMUST00000020441 Fam50aQ9WV03 339 aaKnown RBP7,78□□□□□ -1,16
Vps13d-201ENSMUST00000020441 Abcc8B2RUS7 1588 aa7,78□□□□□ -1,16
Vps13d-201ENSMUST00000020441 Ccer2J3QPU5 274 aa7,78□□□□□ -1,16
Vps13d-201ENSMUST00000020441 TonslQ6NZL6 1363 aa7,78□□□□□ -1,16
Vps13d-201ENSMUST00000020441 Amer1Q7TS75 1132 aa7,78□□□□□ -1,16
Vps13d-201ENSMUST00000020441 Nop58Q6DFW4 536 aaKnown RBP7,77□□□□□ -1,17
Vps13d-201ENSMUST00000020441 Brd4Q9ESU6 1400 aaKnown RBP7,76□□□□□ -1,17
Vps13d-201ENSMUST00000020441 Pcgf6Q99NA9 353 aa7,74□□□□□ -1,17
Vps13d-201ENSMUST00000020441 Slc24a1Q91WD8 1130 aa7,72□□□□□ -1,17
Vps13d-201ENSMUST00000020441 Os9Q8K2C7 672 aa7,7□□□□□ -1,18
Vps13d-201ENSMUST00000020441 ClspnQ80YR7 1315 aa7,65□□□□□ -1,19
Vps13d-201ENSMUST00000020441 Mier1Q5UAK0 511 aa7,62□□□□□ -1,19
Vps13d-201ENSMUST00000020441 Gm35339A0A140LHH9 1649 aa7,62□□□□□ -1,19
Vps13d-201ENSMUST00000020441 Ap3b1Q9Z1T1 1105 aa7,61□□□□□ -1,19
Vps13d-201ENSMUST00000020441 Dcaf1Q80TR8 1506 aa7,61□□□□□ -1,19
Vps13d-201ENSMUST00000020441 Cep164Q5DU05 1446 aa7,6□□□□□ -1,19
Vps13d-201ENSMUST00000020441 Upf2A2AT37 1269 aaKnown RBP7,6□□□□□ -1,19
Vps13d-201ENSMUST00000020441 Eif5bQ05D44 1216 aaKnown RBP7,59□□□□□ -1,19
Vps13d-201ENSMUST00000020441 4933416C03RikQ3V063 378 aa7,59□□□□□ -1,19
Vps13d-201ENSMUST00000020441 Clstn2Q9ER65 966 aa7,58□□□□□ -1,2
Vps13d-201ENSMUST00000020441 Anp32aO35381 247 aa7,57□□□□□ -1,2
Vps13d-201ENSMUST00000020441 Clip1Q922J3 1391 aa7,54□□□□□ -1,2
Vps13d-201ENSMUST00000020441 Rb1cc1Q9ESK9 1588 aa7,54□□□□□ -1,2
Vps13d-201ENSMUST00000020441 NacadQ5SWP3 1504 aa7,51□□□□□ -1,21
Vps13d-201ENSMUST00000020441 Nlrp6Q91WS2 869 aa7,51□□□□□ -1,21
Vps13d-201ENSMUST00000020441 Ccdc9Q8VC31 543 aaKnown RBP7,5□□□□□ -1,21
Vps13d-201ENSMUST00000020441 Ubl4bQ9CQ84 188 aa7,49□□□□□ -1,21
Vps13d-201ENSMUST00000020441 Supt5hO55201 1082 aaKnown RBP7,49□□□□□ -1,21
Vps13d-201ENSMUST00000020441 Hnrnpul2Q00PI9 745 aaKnown RBP7,48□□□□□ -1,21
Vps13d-201ENSMUST00000020441 Zfp777B9EKF4 885 aa7,47□□□□□ -1,21
Vps13d-201ENSMUST00000020441 Anks4bQ8K3X6 423 aa7,47□□□□□ -1,21
Vps13d-201ENSMUST00000020441 Gm13697A2AK42 830 aa7,47□□□□□ -1,21
Vps13d-201ENSMUST00000020441 Lmod2Q3UHZ5 550 aa7,44□□□□□ -1,22
Vps13d-201ENSMUST00000020441 Plekhg3Q4VAC9 1341 aa7,44□□□□□ -1,22
Vps13d-201ENSMUST00000020441 Cwc22Q8C5N3 908 aaKnown RBP7,42□□□□□ -1,22
Vps13d-201ENSMUST00000020441 Baz1aO88379 1555 aa7,41□□□□□ -1,22
Vps13d-201ENSMUST00000020441 Aplp2Q06335 707 aa7,39□□□□□ -1,23
Vps13d-201ENSMUST00000020441 BlmO88700 1416 aa7,39□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Rsf1E9PWW9 1441 aaKnown RBP7,38□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Atp1b4Q99ME6 356 aa7,38□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Ccdc18Q640L5 1455 aa7,38□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Erich6D3Z6S9 713 aa7,37□□□□□ -1,23
Vps13d-201ENSMUST00000020441 DiexfQ8BTT6 772 aaKnown RBP7,37□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Chmp4bQ9D8B3 224 aaKnown RBP7,37□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Ttbk1Q6PCN3 1308 aa7,36□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Eea1Q8BL66 1411 aa7,36□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Gm13695A2AK44 830 aa7,35□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Golga3P55937 1487 aa7,35□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Mia2Q91ZV0 1396 aa7,35□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Calr4Q3TQS0 420 aa7,35□□□□□ -1,23
Vps13d-201ENSMUST00000020441 DaxxO35613 739 aa7,34□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Setd5Q5XJV7 1441 aa7,34□□□□□ -1,23
Vps13d-201ENSMUST00000020441 Chic1Q8CBW7 227 aa7,33□□□□□ -1,24
Vps13d-201ENSMUST00000020441 Arid4bA2CG63 1314 aaKnown RBP7,33□□□□□ -1,24
Vps13d-201ENSMUST00000020441 Crybg2B7ZCC2 1516 aa7,32□□□□□ -1,24
Vps13d-201ENSMUST00000020441 Zbtb7cQ8VCZ7 619 aa7,32□□□□□ -1,24
Vps13d-201ENSMUST00000020441 IqubQ8CDK3 788 aa7,31□□□□□ -1,24
Vps13d-201ENSMUST00000020441 Ercc6F8VPZ5 1481 aa7,3□□□□□ -1,24
Vps13d-201ENSMUST00000020441 Mbd3Q9Z2D8 285 aaKnown RBP7,29□□□□□ -1,24
Vps13d-201ENSMUST00000020441 Kif15Q6P9L6 1387 aa7,28□□□□□ -1,24
Vps13d-201ENSMUST00000020441 Rsph4aQ8BYM7 716 aa7,27□□□□□ -1,25
Retrieved 100 of 22,080 RNA–protein pairs in 20,3 ms