RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Rhox8Q6VSS7 320 aa9.53□□□□□ -0.88
Vps13d-201ENSMUST00000020441 Rpgrip1Q9EPQ2 1331 aa9.14□□□□□ -0.95
Vps13d-201ENSMUST00000020441 Cngb1E1AZ71 1325 aa8.77□□□□□ -1.01
Vps13d-201ENSMUST00000020441 Trim41Q5NCC3 630 aa8.66□□□□□ -1.02
Vps13d-201ENSMUST00000020441 Las1lA2BE28 776 aaKnown RBP8.64□□□□□ -1.03
Vps13d-201ENSMUST00000020441 NischQ80TM9 1593 aa8.57□□□□□ -1.04
Vps13d-201ENSMUST00000020441 Pelp1Q9DBD5 1123 aaKnown RBP8.56□□□□□ -1.04
Vps13d-201ENSMUST00000020441 Esf1Q3V1V3 845 aaKnown RBP8.56□□□□□ -1.04
Vps13d-201ENSMUST00000020441 Rtl1Q7M732 1744 aa8.43□□□□□ -1.06
Vps13d-201ENSMUST00000020441 Ccdc136Q3TVA9 1136 aa8.42□□□□□ -1.06
Vps13d-201ENSMUST00000020441 Ccdc180J3QNE4 1664 aa8.36□□□□□ -1.07
Vps13d-201ENSMUST00000020441 Stra8P70278 393 aa8.35□□□□□ -1.07
Vps13d-201ENSMUST00000020441 NefmP08553 848 aa8.34□□□□□ -1.07
Vps13d-201ENSMUST00000020441 Npm2Q80W85 207 aa8.32□□□□□ -1.08
Vps13d-201ENSMUST00000020441 HrcG5E8J6 738 aa8.32□□□□□ -1.08
Vps13d-201ENSMUST00000020441 Ube2uB1AUC4 352 aa8.32□□□□□ -1.08
Vps13d-201ENSMUST00000020441 Zeb1Q64318 1117 aa8.29□□□□□ -1.08
Vps13d-201ENSMUST00000020441 Wdr66E9Q743 1299 aa8.26□□□□□ -1.09
Vps13d-201ENSMUST00000020441 Acin1Q9JIX8 1338 aaKnown RBP8.17□□□□□ -1.1
Vps13d-201ENSMUST00000020441 Gab3Q8BSM5 595 aa8.15□□□□□ -1.1
Vps13d-201ENSMUST00000020441 Ehmt2Q9Z148 1263 aaKnown RBP8.15□□□□□ -1.11
Vps13d-201ENSMUST00000020441 Myt1lP97500 1187 aa8.14□□□□□ -1.11
Vps13d-201ENSMUST00000020441 CenpbP27790 599 aa8.09□□□□□ -1.11
Vps13d-201ENSMUST00000020441 Myt1Q8CFC2 1127 aa8.07□□□□□ -1.12
Vps13d-201ENSMUST00000020441 Anp32bQ9EST5 272 aaKnown RBP8.06□□□□□ -1.12
Vps13d-201ENSMUST00000020441 Tnnt3Q9QZ47 272 aa8.03□□□□□ -1.12
Vps13d-201ENSMUST00000020441 UbtfP25976 765 aaKnown RBP7.99□□□□□ -1.13
Vps13d-201ENSMUST00000020441 Hdac5Q9Z2V6 1113 aa7.98□□□□□ -1.13
Vps13d-201ENSMUST00000020441 Abcc9P70170 1546 aa7.96□□□□□ -1.14
Vps13d-201ENSMUST00000020441 Cdk11bP24788 784 aaKnown RBP7.92□□□□□ -1.14
Vps13d-201ENSMUST00000020441 NrdcQ8BHG1 1161 aa7.92□□□□□ -1.14
Vps13d-201ENSMUST00000020441 NeflP08551 543 aa7.91□□□□□ -1.14
Vps13d-201ENSMUST00000020441 Rtl5Q5DTT4 599 aa7.89□□□□□ -1.15
Vps13d-201ENSMUST00000020441 Neurod1Q60867 357 aa7.89□□□□□ -1.15
Vps13d-201ENSMUST00000020441 NclP09405 707 aaKnown RBP7.88□□□□□ -1.15
Vps13d-201ENSMUST00000020441 Zcchc6Q5BLK4 1491 aaKnown RBP7.87□□□□□ -1.15
Vps13d-201ENSMUST00000020441 Il27Q8K3I6 234 aa7.82□□□□□ -1.16
Vps13d-201ENSMUST00000020441 4930567H17RikQ3V0K5 233 aa7.81□□□□□ -1.16
Vps13d-201ENSMUST00000020441 Npm1Q61937 292 aaKnown RBP7.79□□□□□ -1.16
Vps13d-201ENSMUST00000020441 Fam50aQ9WV03 339 aaKnown RBP7.78□□□□□ -1.16
Vps13d-201ENSMUST00000020441 Abcc8B2RUS7 1588 aa7.78□□□□□ -1.16
Vps13d-201ENSMUST00000020441 Ccer2J3QPU5 274 aa7.78□□□□□ -1.16
Vps13d-201ENSMUST00000020441 TonslQ6NZL6 1363 aa7.78□□□□□ -1.16
Vps13d-201ENSMUST00000020441 Amer1Q7TS75 1132 aa7.78□□□□□ -1.16
Vps13d-201ENSMUST00000020441 Nop58Q6DFW4 536 aaKnown RBP7.77□□□□□ -1.17
Vps13d-201ENSMUST00000020441 Brd4Q9ESU6 1400 aaKnown RBP7.76□□□□□ -1.17
Vps13d-201ENSMUST00000020441 Pcgf6Q99NA9 353 aa7.74□□□□□ -1.17
Vps13d-201ENSMUST00000020441 Slc24a1Q91WD8 1130 aa7.72□□□□□ -1.17
Vps13d-201ENSMUST00000020441 Os9Q8K2C7 672 aa7.7□□□□□ -1.18
Vps13d-201ENSMUST00000020441 ClspnQ80YR7 1315 aa7.65□□□□□ -1.19
Vps13d-201ENSMUST00000020441 Mier1Q5UAK0 511 aa7.62□□□□□ -1.19
Vps13d-201ENSMUST00000020441 Gm35339A0A140LHH9 1649 aa7.62□□□□□ -1.19
Vps13d-201ENSMUST00000020441 Ap3b1Q9Z1T1 1105 aa7.61□□□□□ -1.19
Vps13d-201ENSMUST00000020441 Dcaf1Q80TR8 1506 aa7.61□□□□□ -1.19
Vps13d-201ENSMUST00000020441 Cep164Q5DU05 1446 aa7.6□□□□□ -1.19
Vps13d-201ENSMUST00000020441 Upf2A2AT37 1269 aaKnown RBP7.6□□□□□ -1.19
Vps13d-201ENSMUST00000020441 Eif5bQ05D44 1216 aaKnown RBP7.59□□□□□ -1.19
Vps13d-201ENSMUST00000020441 4933416C03RikQ3V063 378 aa7.59□□□□□ -1.19
Vps13d-201ENSMUST00000020441 Clstn2Q9ER65 966 aa7.58□□□□□ -1.2
Vps13d-201ENSMUST00000020441 Anp32aO35381 247 aa7.57□□□□□ -1.2
Vps13d-201ENSMUST00000020441 Clip1Q922J3 1391 aa7.54□□□□□ -1.2
Vps13d-201ENSMUST00000020441 Rb1cc1Q9ESK9 1588 aa7.54□□□□□ -1.2
Vps13d-201ENSMUST00000020441 NacadQ5SWP3 1504 aa7.51□□□□□ -1.21
Vps13d-201ENSMUST00000020441 Nlrp6Q91WS2 869 aa7.51□□□□□ -1.21
Vps13d-201ENSMUST00000020441 Ccdc9Q8VC31 543 aaKnown RBP7.5□□□□□ -1.21
Vps13d-201ENSMUST00000020441 Ubl4bQ9CQ84 188 aa7.49□□□□□ -1.21
Vps13d-201ENSMUST00000020441 Supt5hO55201 1082 aaKnown RBP7.49□□□□□ -1.21
Vps13d-201ENSMUST00000020441 Hnrnpul2Q00PI9 745 aaKnown RBP7.48□□□□□ -1.21
Vps13d-201ENSMUST00000020441 Zfp777B9EKF4 885 aa7.47□□□□□ -1.21
Vps13d-201ENSMUST00000020441 Anks4bQ8K3X6 423 aa7.47□□□□□ -1.21
Vps13d-201ENSMUST00000020441 Gm13697A2AK42 830 aa7.47□□□□□ -1.21
Vps13d-201ENSMUST00000020441 Lmod2Q3UHZ5 550 aa7.44□□□□□ -1.22
Vps13d-201ENSMUST00000020441 Plekhg3Q4VAC9 1341 aa7.44□□□□□ -1.22
Vps13d-201ENSMUST00000020441 Cwc22Q8C5N3 908 aaKnown RBP7.42□□□□□ -1.22
Vps13d-201ENSMUST00000020441 Baz1aO88379 1555 aa7.41□□□□□ -1.22
Vps13d-201ENSMUST00000020441 Aplp2Q06335 707 aa7.39□□□□□ -1.23
Vps13d-201ENSMUST00000020441 BlmO88700 1416 aa7.39□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Rsf1E9PWW9 1441 aaKnown RBP7.38□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Atp1b4Q99ME6 356 aa7.38□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Ccdc18Q640L5 1455 aa7.38□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Erich6D3Z6S9 713 aa7.37□□□□□ -1.23
Vps13d-201ENSMUST00000020441 DiexfQ8BTT6 772 aaKnown RBP7.37□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Chmp4bQ9D8B3 224 aaKnown RBP7.37□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Ttbk1Q6PCN3 1308 aa7.36□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Eea1Q8BL66 1411 aa7.36□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Gm13695A2AK44 830 aa7.35□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Golga3P55937 1487 aa7.35□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Mia2Q91ZV0 1396 aa7.35□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Calr4Q3TQS0 420 aa7.35□□□□□ -1.23
Vps13d-201ENSMUST00000020441 DaxxO35613 739 aa7.34□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Setd5Q5XJV7 1441 aa7.34□□□□□ -1.23
Vps13d-201ENSMUST00000020441 Chic1Q8CBW7 227 aa7.33□□□□□ -1.24
Vps13d-201ENSMUST00000020441 Arid4bA2CG63 1314 aaKnown RBP7.33□□□□□ -1.24
Vps13d-201ENSMUST00000020441 Crybg2B7ZCC2 1516 aa7.32□□□□□ -1.24
Vps13d-201ENSMUST00000020441 Zbtb7cQ8VCZ7 619 aa7.32□□□□□ -1.24
Vps13d-201ENSMUST00000020441 IqubQ8CDK3 788 aa7.31□□□□□ -1.24
Vps13d-201ENSMUST00000020441 Ercc6F8VPZ5 1481 aa7.3□□□□□ -1.24
Vps13d-201ENSMUST00000020441 Mbd3Q9Z2D8 285 aaKnown RBP7.29□□□□□ -1.24
Vps13d-201ENSMUST00000020441 Kif15Q6P9L6 1387 aa7.28□□□□□ -1.24
Vps13d-201ENSMUST00000020441 Rsph4aQ8BYM7 716 aa7.27□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 70.7 ms