RNA–Protein interactions for RNA: tA(AGC)J

tA(AGC)J, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene tA(AGC)J, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tA(AGC)JtA(AGC)J OPY1P38271 328 aa9.57□□□□□ -0.88
tA(AGC)JtA(AGC)J RPN10P38886 268 aaKnown RBP9.57□□□□□ -0.88
tA(AGC)JtA(AGC)J AZR1P50080 613 aa9.57□□□□□ -0.88
tA(AGC)JtA(AGC)J GDE1Q02979 1223 aa9.57□□□□□ -0.88
tA(AGC)JtA(AGC)J TVP38P36164 337 aa9.56□□□□□ -0.88
tA(AGC)JtA(AGC)J ISW1P38144 1129 aa9.56□□□□□ -0.88
tA(AGC)JtA(AGC)J HMF1P40037 129 aaKnown RBP9.56□□□□□ -0.88
tA(AGC)JtA(AGC)J SGM1P47166 707 aa9.56□□□□□ -0.88
tA(AGC)JtA(AGC)J HUL5P53119 910 aa9.56□□□□□ -0.88
tA(AGC)JtA(AGC)J BNI5P53890 448 aaKnown RBP9.56□□□□□ -0.88
tA(AGC)JtA(AGC)J YNL115CP53925 644 aa9.56□□□□□ -0.88
tA(AGC)JtA(AGC)J OYE2Q03558 400 aaKnown RBP9.56□□□□□ -0.88
tA(AGC)JtA(AGC)J VPS1P21576 704 aaKnown RBP9.55□□□□□ -0.88
tA(AGC)JtA(AGC)J ESS1P22696 170 aa9.55□□□□□ -0.88
tA(AGC)JtA(AGC)J MSC7P38694 644 aa9.55□□□□□ -0.88
tA(AGC)JtA(AGC)J TVP23P38962 199 aa9.55□□□□□ -0.88
tA(AGC)JtA(AGC)J INP51P40559 946 aaKnown RBP9.55□□□□□ -0.88
tA(AGC)JtA(AGC)J UBP10P53874 792 aaPredicted RBP9.55□□□□□ -0.88
tA(AGC)JtA(AGC)J AIM33Q04516 312 aa9.55□□□□□ -0.88
tA(AGC)JtA(AGC)J YLR407WQ06070 228 aa9.55□□□□□ -0.88
tA(AGC)JtA(AGC)J SRO9P25567 434 aaKnown RBP9.54□□□□□ -0.88
tA(AGC)JtA(AGC)J ORC6P38826 435 aa9.54□□□□□ -0.88
tA(AGC)JtA(AGC)J CIT3P43635 486 aa9.54□□□□□ -0.88
tA(AGC)JtA(AGC)J FOL2P51601 243 aaKnown RBP9.54□□□□□ -0.88
tA(AGC)JtA(AGC)J YML020WQ03722 664 aa9.54□□□□□ -0.88
tA(AGC)JtA(AGC)J CRD1Q07560 283 aa9.54□□□□□ -0.88
tA(AGC)JtA(AGC)J GPI13Q07830 1017 aa9.54□□□□□ -0.88
tA(AGC)JtA(AGC)J CDC6P09119 513 aa9.53□□□□□ -0.88
tA(AGC)JtA(AGC)J CAD1P24813 409 aaKnown RBP9.53□□□□□ -0.88
tA(AGC)JtA(AGC)J SAS3P34218 831 aa9.53□□□□□ -0.88
tA(AGC)JtA(AGC)J YEL025CP39991 1188 aa9.53□□□□□ -0.88
tA(AGC)JtA(AGC)J ALD5P40047 520 aaKnown RBP9.53□□□□□ -0.88
tA(AGC)JtA(AGC)J GPD2P41911 440 aaKnown RBP9.53□□□□□ -0.88
tA(AGC)JtA(AGC)J ENT3P47160 408 aa9.53□□□□□ -0.88
tA(AGC)JtA(AGC)J RET3P53600 189 aa9.53□□□□□ -0.88
tA(AGC)JtA(AGC)J SVF1Q05515 481 aa9.53□□□□□ -0.88
tA(AGC)JtA(AGC)J PHM6Q05637 104 aa9.53□□□□□ -0.88
tA(AGC)JtA(AGC)J PGK1P00560 416 aaKnown RBP9.52□□□□□ -0.89
tA(AGC)JtA(AGC)J AFT1P22149 690 aa9.52□□□□□ -0.89
tA(AGC)JtA(AGC)J GAA1P39012 614 aa9.52□□□□□ -0.89
tA(AGC)JtA(AGC)J SAD1P43589 448 aa9.52□□□□□ -0.89
tA(AGC)JtA(AGC)J PSP2P50109 593 aaKnown RBP9.52□□□□□ -0.89
tA(AGC)JtA(AGC)J ZPR1P53303 486 aaKnown RBP9.52□□□□□ -0.89
tA(AGC)JtA(AGC)J DSE4P53753 1117 aa9.52□□□□□ -0.89
tA(AGC)JtA(AGC)J CSM3Q04659 317 aa9.52□□□□□ -0.89
tA(AGC)JtA(AGC)J MOT1P32333 1867 aa9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J ILV1P00927 576 aaKnown RBP9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J RNR2P09938 399 aaKnown RBP9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J RPC31P17890 251 aa9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J CBP3P21560 335 aa9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J RME1P32338 300 aaKnown RBP9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J YHL017WP38745 532 aa9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J CTF18P49956 741 aa9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J DIP5P53388 608 aa9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J NAF1P53919 492 aaKnown RBP9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J CEX1Q12453 761 aa9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J YDR034W-BQ6Q5X2 51 aa9.51□□□□□ -0.89
tA(AGC)JtA(AGC)J IRE1P32361 1115 aa9.5□□□□□ -0.89
tA(AGC)JtA(AGC)J BRL1P38770 471 aa9.5□□□□□ -0.89
tA(AGC)JtA(AGC)J JHD1P40034 492 aa9.5□□□□□ -0.89
tA(AGC)JtA(AGC)J ATG32P40458 529 aa9.5□□□□□ -0.89
tA(AGC)JtA(AGC)J BRE2P43132 505 aa9.5□□□□□ -0.89
tA(AGC)JtA(AGC)J CNM67P53865 581 aaKnown RBP9.5□□□□□ -0.89
tA(AGC)JtA(AGC)J TRS120Q04183 1289 aa9.5□□□□□ -0.89
tA(AGC)JtA(AGC)J SUP45P12385 437 aaKnown RBP9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J THR4P16120 514 aaKnown RBP9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J UBC1P21734 215 aaKnown RBP9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J CDC48P25694 835 aaKnown RBP9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J SMY2P32909 740 aaKnown RBP9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J PGM1P33401 570 aaKnown RBP9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J POA1P38218 177 aa9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J BUD6P41697 788 aa9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J RSC8P43609 557 aaKnown RBP9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J MDR1P53258 950 aa9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J MFM1Q02783 413 aa9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J SLK19Q08581 821 aaKnown RBP9.49□□□□□ -0.89
tA(AGC)JtA(AGC)J HSP82P02829 709 aaKnown RBP9.48□□□□□ -0.89
tA(AGC)JtA(AGC)J CLN3P13365 580 aa9.48□□□□□ -0.89
tA(AGC)JtA(AGC)J SUV3P32580 737 aa9.48□□□□□ -0.89
tA(AGC)JtA(AGC)J GUA1P38625 525 aaKnown RBP9.48□□□□□ -0.89
tA(AGC)JtA(AGC)J STT3P39007 718 aaKnown RBP9.48□□□□□ -0.89
tA(AGC)JtA(AGC)J PSK2Q08217 1101 aa9.48□□□□□ -0.89
tA(AGC)JtA(AGC)J NCR1Q12200 1170 aa9.48□□□□□ -0.89
tA(AGC)JtA(AGC)J DED1P06634 604 aaKnown RBP9.47□□□□□ -0.89
tA(AGC)JtA(AGC)J SWI6P09959 803 aa9.47□□□□□ -0.89
tA(AGC)JtA(AGC)J GSY1P23337 708 aa9.47□□□□□ -0.89
tA(AGC)JtA(AGC)J MSS51P32335 436 aa9.47□□□□□ -0.89
tA(AGC)JtA(AGC)J CUS1Q02554 436 aaPredicted RBP9.47□□□□□ -0.89
tA(AGC)JtA(AGC)J DCS2Q12123 353 aa9.47□□□□□ -0.89
tA(AGC)JtA(AGC)J GET3Q12154 354 aaKnown RBP9.47□□□□□ -0.89
tA(AGC)JtA(AGC)J UBR2Q07963 1872 aa9.47□□□□□ -0.89
tA(AGC)JtA(AGC)J FIS1P40515 155 aa9.46□□□□□ -0.9
tA(AGC)JtA(AGC)J YGR035CP53222 116 aa9.46□□□□□ -0.9
tA(AGC)JtA(AGC)J RPL19AP0CX82 189 aaKnown RBP9.45□□□□□ -0.9
tA(AGC)JtA(AGC)J RPL19BP0CX83 189 aaPredicted RBP9.45□□□□□ -0.9
tA(AGC)JtA(AGC)J FUB1P25659 250 aa9.45□□□□□ -0.9
tA(AGC)JtA(AGC)J ASF1P32447 279 aa9.45□□□□□ -0.9
tA(AGC)JtA(AGC)J DID4P36108 232 aa9.45□□□□□ -0.9
tA(AGC)JtA(AGC)J SPO74P45819 413 aa9.45□□□□□ -0.9
tA(AGC)JtA(AGC)J MCM6P53091 1017 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms