RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	UTP4	Q06679	776 aa	Known RBP	5.3	□□□□□ -1.56
SPN1	YPR133C	LEU1	P07264	779 aa	Known RBP	5.29	□□□□□ -1.56
SPN1	YPR133C	SUV3	P32580	737 aa		5.29	□□□□□ -1.56
SPN1	YPR133C	HXT5	P38695	592 aa		5.29	□□□□□ -1.56
SPN1	YPR133C	FIR1	P40020	876 aa		5.29	□□□□□ -1.56
SPN1	YPR133C	ATG1	P53104	897 aa		5.29	□□□□□ -1.56
SPN1	YPR133C	SRT1	Q03175	343 aa		5.29	□□□□□ -1.56
SPN1	YPR133C	ECM30	Q06673	1274 aa		5.29	□□□□□ -1.56
SPN1	YPR133C	SUP35	P05453	685 aa	Known RBP	5.28	□□□□□ -1.56
SPN1	YPR133C	RPT3	P33298	428 aa	Known RBP	5.28	□□□□□ -1.56
SPN1	YPR133C	OCT1	P35999	772 aa		5.28	□□□□□ -1.56
SPN1	YPR133C	YFL066C	P43538	392 aa		5.28	□□□□□ -1.56
SPN1	YPR133C	YFH7	P43591	353 aa		5.28	□□□□□ -1.56
SPN1	YPR133C	KRE33	P53914	1056 aa	Known RBP	5.28	□□□□□ -1.56
SPN1	YPR133C	IOC4	Q04213	475 aa		5.28	□□□□□ -1.56
SPN1	YPR133C	PUN1	Q06991	263 aa		5.28	□□□□□ -1.56
SPN1	YPR133C	THI72	Q08579	599 aa		5.28	□□□□□ -1.56
SPN1	YPR133C	YMR084W	A2P2R3	262 aa		5.27	□□□□□ -1.57
SPN1	YPR133C	PMA1	P05030	918 aa	Known RBP	5.27	□□□□□ -1.57
SPN1	YPR133C	ADP1	P25371	1049 aa		5.27	□□□□□ -1.57
SPN1	YPR133C	CDC60	P26637	1090 aa	Known RBP	5.27	□□□□□ -1.57
SPN1	YPR133C	WHI3	P34761	661 aa	Known RBP	5.27	□□□□□ -1.57
SPN1	YPR133C	MRPL16	P38064	232 aa		5.27	□□□□□ -1.57
SPN1	YPR133C	CFT2	Q12102	859 aa	Predicted RBP	5.27	□□□□□ -1.57
SPN1	YPR133C	TY3A-G	Q12173	290 aa		5.27	□□□□□ -1.57
SPN1	YPR133C	STB3	Q12427	513 aa		5.27	□□□□□ -1.57
SPN1	YPR133C	YDR461C-A	Q2V2P7	80 aa		5.27	□□□□□ -1.57
SPN1	YPR133C	TY3A-I	Q99219	290 aa		5.27	□□□□□ -1.57
SPN1	YPR133C	SRS2	P12954	1174 aa		5.26	□□□□□ -1.57
SPN1	YPR133C	CCT8	P47079	568 aa	Known RBP	5.26	□□□□□ -1.57
SPN1	YPR133C	YGR122W	P53272	402 aa		5.26	□□□□□ -1.57
SPN1	YPR133C	HEF3	P53978	1044 aa	Known RBP	5.26	□□□□□ -1.57
SPN1	YPR133C	SYT1	Q06836	1226 aa		5.26	□□□□□ -1.57
SPN1	YPR133C	ICL2	Q12031	575 aa		5.26	□□□□□ -1.57
SPN1	YPR133C	SNU66	Q12420	587 aa	Predicted RBP	5.26	□□□□□ -1.57
SPN1	YPR133C	SNF3	P10870	884 aa		5.25	□□□□□ -1.57
SPN1	YPR133C	RGP1	P16664	663 aa		5.25	□□□□□ -1.57
SPN1	YPR133C	MCD4	P36051	919 aa		5.25	□□□□□ -1.57
SPN1	YPR133C	UBP12	P39538	1254 aa		5.25	□□□□□ -1.57
SPN1	YPR133C	ACA1	P39970	489 aa		5.25	□□□□□ -1.57
SPN1	YPR133C	MPP10	P47083	593 aa	Known RBP	5.25	□□□□□ -1.57
SPN1	YPR133C	MTO1	P53070	669 aa		5.25	□□□□□ -1.57
SPN1	YPR133C	ADE12	P80210	433 aa	Known RBP	5.25	□□□□□ -1.57
SPN1	YPR133C	TUB2	P02557	457 aa	Known RBP	5.24	□□□□□ -1.57
SPN1	YPR133C	RPP1A	P05318	106 aa	Predicted RBP	5.24	□□□□□ -1.57
SPN1	YPR133C	SWC3	P31376	625 aa		5.24	□□□□□ -1.57
SPN1	YPR133C	UIP5	P36137	443 aa		5.24	□□□□□ -1.57
SPN1	YPR133C	YBR197C	P38306	217 aa		5.24	□□□□□ -1.57
SPN1	YPR133C	VAB2	P40003	282 aa		5.24	□□□□□ -1.57
SPN1	YPR133C	AIM21	P40563	679 aa		5.24	□□□□□ -1.57
SPN1	YPR133C	YFL040W	P43562	540 aa		5.24	□□□□□ -1.57
SPN1	YPR133C	YPL034W	Q03083	165 aa		5.24	□□□□□ -1.57
SPN1	YPR133C	YOR131C	Q12486	218 aa		5.24	□□□□□ -1.57
SPN1	YPR133C	YPR053C	Q6Q5F3	151 aa		5.24	□□□□□ -1.57
SPN1	YPR133C	FPS1	P23900	669 aa		5.23	□□□□□ -1.57
SPN1	YPR133C	KAP122	P32767	1081 aa		5.23	□□□□□ -1.57
SPN1	YPR133C	GLO3	P38682	493 aa	Known RBP	5.23	□□□□□ -1.57
SPN1	YPR133C	LYS14	P40971	790 aa		5.23	□□□□□ -1.57
SPN1	YPR133C	SUT2	Q12286	268 aa		5.23	□□□□□ -1.57
SPN1	YPR133C	MOT1	P32333	1867 aa		5.23	□□□□□ -1.57
SPN1	YPR133C	MRPL33	P20084	86 aa		5.22	□□□□□ -1.57
SPN1	YPR133C	RAD24	P32641	659 aa		5.22	□□□□□ -1.57
SPN1	YPR133C	SLD2	P34252	453 aa		5.22	□□□□□ -1.57
SPN1	YPR133C	PTK1	P36002	662 aa	Predicted RBP	5.22	□□□□□ -1.57
SPN1	YPR133C	YBL028C	P38202	106 aa		5.22	□□□□□ -1.57
SPN1	YPR133C	AFG3	P39925	761 aa		5.22	□□□□□ -1.57
SPN1	YPR133C	YIR042C	P40586	236 aa		5.22	□□□□□ -1.57
SPN1	YPR133C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	not detected
SPN1	YPR133C	BRE5	P53741	515 aa	Known RBP	5.22	□□□□□ -1.57
SPN1	YPR133C	RPL34A	P87262	121 aa	Predicted RBP	5.22	□□□□□ -1.57
SPN1	YPR133C	FMP30	Q02883	468 aa		5.22	□□□□□ -1.57
SPN1	YPR133C	PNP1	Q05788	311 aa		5.22	□□□□□ -1.57
SPN1	YPR133C	AHC1	Q12433	566 aa		5.22	□□□□□ -1.57
SPN1	YPR133C	YDR034W-B	Q6Q5X2	51 aa		5.22	□□□□□ -1.57
SPN1	YPR133C	ISC10	P32645	267 aa		5.21	□□□□□ -1.58
SPN1	YPR133C	MDL2	P33311	773 aa		5.21	□□□□□ -1.58
SPN1	YPR133C	MXR1	P40029	184 aa		5.21	□□□□□ -1.58
SPN1	YPR133C	QDR2	P40474	542 aa		5.21	□□□□□ -1.58
SPN1	YPR133C	SKP1	P52286	194 aa		5.21	□□□□□ -1.58
SPN1	YPR133C	SNU71	P53207	620 aa	Known RBP	5.21	□□□□□ -1.58
SPN1	YPR133C	INM2	Q05533	292 aa		5.21	□□□□□ -1.58
SPN1	YPR133C	PCL8	Q08966	492 aa		5.21	□□□□□ -1.58
SPN1	YPR133C	MDM20	Q12387	796 aa	Known RBP	5.21	□□□□□ -1.58
SPN1	YPR133C	TUS1	Q06412	1307 aa		5.21	□□□□□ -1.58
SPN1	YPR133C	RPC31	P17890	251 aa		5.2	□□□□□ -1.58
SPN1	YPR133C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
SPN1	YPR133C	VMA3	P25515	160 aa		5.2	□□□□□ -1.58
SPN1	YPR133C	BOI2	P39969	1040 aa		5.2	□□□□□ -1.58
SPN1	YPR133C	MSH4	P40965	878 aa	Predicted RBP	5.2	□□□□□ -1.58
SPN1	YPR133C	NOP2	P40991	618 aa	Known RBP	5.2	□□□□□ -1.58
SPN1	YPR133C	CUS1	Q02554	436 aa	Predicted RBP	5.2	□□□□□ -1.58
SPN1	YPR133C	MYO1	P08964	1928 aa		5.19	□□□□□ -1.58
SPN1	YPR133C	HIP1	P06775	603 aa		5.19	□□□□□ -1.58
SPN1	YPR133C	SEC18	P18759	758 aa	Known RBP	5.19	□□□□□ -1.58
SPN1	YPR133C	CDC3	P32457	520 aa	Known RBP	5.19	□□□□□ -1.58
SPN1	YPR133C	RRN6	P32786	894 aa		5.19	□□□□□ -1.58
SPN1	YPR133C	SSF1	P38789	453 aa	Predicted RBP	5.19	□□□□□ -1.58
SPN1	YPR133C	DYS1	P38791	387 aa		5.19	□□□□□ -1.58
SPN1	YPR133C	SKN7	P38889	622 aa		5.19	□□□□□ -1.58
SPN1	YPR133C	UBX5	Q06682	500 aa		5.19	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms