RNA–Protein interactions for RNA: YOR076C

SKI7, Transcript of Coupling protein for the Ski complex and cytoplasmic exosome, yeast

Gene SKI7, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI7	YOR076C	MPS1	P54199	764 aa		0.75	□□□□□ -2.29
SKI7	YOR076C	RSM24	Q03976	319 aa		0.75	□□□□□ -2.29
SKI7	YOR076C	GEP3	Q08622	556 aa		0.75	□□□□□ -2.29
SKI7	YOR076C	ILV6	P25605	309 aa	Known RBP	0.74	□□□□□ -2.29
SKI7	YOR076C	TDP1	P38319	544 aa		0.74	□□□□□ -2.29
SKI7	YOR076C	TAH11	P47112	604 aa		0.74	□□□□□ -2.29
SKI7	YOR076C	RPB10	P22139	70 aa		0.74	□□□□□ -2.29
SKI7	YOR076C	EXO5	P38289	585 aa		0.74	□□□□□ -2.29
SKI7	YOR076C	SIZ1	Q04195	904 aa		0.74	□□□□□ -2.29
SKI7	YOR076C	NOB1	Q08444	459 aa	Known RBP	0.74	□□□□□ -2.29
SKI7	YOR076C	KCS1	Q12494	1050 aa		0.74	□□□□□ -2.29
SKI7	YOR076C	SNF5	P18480	905 aa		0.73	□□□□□ -2.29
SKI7	YOR076C	KTR4	P38131	464 aa		0.73	□□□□□ -2.29
SKI7	YOR076C	COQ4	O13525	335 aa		0.72	□□□□□ -2.29
SKI7	YOR076C	CCZ1	P38273	704 aa		0.72	□□□□□ -2.29
SKI7	YOR076C	ADY3	Q07732	790 aa		0.72	□□□□□ -2.29
SKI7	YOR076C	ENB1	Q08299	606 aa		0.72	□□□□□ -2.29
SKI7	YOR076C	SMC1	P32908	1225 aa		0.72	□□□□□ -2.29
SKI7	YOR076C	RFC5	P38251	354 aa		0.72	□□□□□ -2.29
SKI7	YOR076C	QNS1	P38795	714 aa	Known RBP	0.72	□□□□□ -2.29
SKI7	YOR076C	PIK1	P39104	1066 aa		0.72	□□□□□ -2.29
SKI7	YOR076C	CHA4	P43634	648 aa		0.72	□□□□□ -2.29
SKI7	YOR076C	ZAP1	P47043	880 aa		0.72	□□□□□ -2.29
SKI7	YOR076C	ERG4	P25340	473 aa		0.71	□□□□□ -2.3
SKI7	YOR076C	ADY2	P25613	283 aa		0.71	□□□□□ -2.3
SKI7	YOR076C	RTG2	P32608	588 aa	Known RBP	0.71	□□□□□ -2.3
SKI7	YOR076C	BNA3	P47039	444 aa	Known RBP	0.71	□□□□□ -2.3
SKI7	YOR076C	TIF1	P10081	395 aa	Known RBP	0.7	□□□□□ -2.3
SKI7	YOR076C	GFA1	P14742	717 aa	Known RBP	0.7	□□□□□ -2.3
SKI7	YOR076C	MET12	P46151	657 aa		0.7	□□□□□ -2.3
SKI7	YOR076C	VPS73	P53142	486 aa	Known RBP	0.7	□□□□□ -2.3
SKI7	YOR076C	YAF9	P53930	226 aa		0.7	□□□□□ -2.3
SKI7	YOR076C	RAT1	Q02792	1006 aa	Known RBP	0.7	□□□□□ -2.3
SKI7	YOR076C	TPO1	Q07824	586 aa		0.7	□□□□□ -2.3
SKI7	YOR076C	TRM13	Q12383	476 aa		0.7	□□□□□ -2.3
SKI7	YOR076C	HIS5	P07172	385 aa		0.7	□□□□□ -2.3
SKI7	YOR076C	HSE1	P38753	452 aa		0.7	□□□□□ -2.3
SKI7	YOR076C	YJL007C	P47080	104 aa		0.7	□□□□□ -2.3
SKI7	YOR076C	UTP5	Q04177	643 aa	Known RBP	0.7	□□□□□ -2.3
SKI7	YOR076C	MRI1	Q06489	411 aa	Known RBP	0.7	□□□□□ -2.3
SKI7	YOR076C	RSB1	Q08417	382 aa		0.7	□□□□□ -2.3
SKI7	YOR076C	PPR1	P07272	904 aa	Predicted RBP	0.69	□□□□□ -2.3
SKI7	YOR076C	RIM13	Q03792	727 aa		0.69	□□□□□ -2.3
SKI7	YOR076C	MSC2	Q03455	724 aa		0.69	□□□□□ -2.3
SKI7	YOR076C	HBT1	Q07653	1046 aa	Known RBP	0.69	□□□□□ -2.3
SKI7	YOR076C	CCT4	P39078	528 aa	Known RBP	0.68	□□□□□ -2.3
SKI7	YOR076C	ATG32	P40458	529 aa		0.68	□□□□□ -2.3
SKI7	YOR076C	MND2	P40577	368 aa		0.68	□□□□□ -2.3
SKI7	YOR076C	TNA1	P53322	534 aa		0.68	□□□□□ -2.3
SKI7	YOR076C	RNT1	Q02555	471 aa		0.68	□□□□□ -2.3
SKI7	YOR076C	MET6	P05694	767 aa	Known RBP	0.68	□□□□□ -2.3
SKI7	YOR076C	KIN2	P13186	1147 aa	Known RBP	0.68	□□□□□ -2.3
SKI7	YOR076C	XKS1	P42826	600 aa		0.68	□□□□□ -2.3
SKI7	YOR076C	CDC55	Q00362	526 aa		0.68	□□□□□ -2.3
SKI7	YOR076C	YPL068C	Q02749	293 aa		0.68	□□□□□ -2.3
SKI7	YOR076C	HOS3	Q02959	697 aa	Known RBP	0.68	□□□□□ -2.3
SKI7	YOR076C	ALG7	P07286	448 aa		0.67	□□□□□ -2.3
SKI7	YOR076C	APL1	P27351	700 aa		0.67	□□□□□ -2.3
SKI7	YOR076C	YKL077W	P36081	392 aa		0.67	□□□□□ -2.3
SKI7	YOR076C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	0.67	□□□□□ -2.3	not detected
SKI7	YOR076C	PUN1	Q06991	263 aa		0.67	□□□□□ -2.3
SKI7	YOR076C	LAP2	Q10740	671 aa		0.67	□□□□□ -2.3
SKI7	YOR076C	HCA4	P20448	770 aa	Known RBP	0.66	□□□□□ -2.3
SKI7	YOR076C	KAR4	P25583	335 aa		0.66	□□□□□ -2.3
SKI7	YOR076C	KIP1	P28742	1111 aa		0.66	□□□□□ -2.3
SKI7	YOR076C	ORC2	P32833	620 aa		0.66	□□□□□ -2.3
SKI7	YOR076C	YFL054C	P43549	646 aa		0.66	□□□□□ -2.3
SKI7	YOR076C	ECM23	Q02710	187 aa		0.66	□□□□□ -2.3
SKI7	YOR076C	PMT7	Q06644	662 aa		0.66	□□□□□ -2.3
SKI7	YOR076C	PEP7	P32609	515 aa		0.66	□□□□□ -2.3
SKI7	YOR076C	UBX7	P38349	436 aa		0.66	□□□□□ -2.3
SKI7	YOR076C	MTR4	P47047	1073 aa	Known RBP	0.66	□□□□□ -2.3
SKI7	YOR076C	NUT1	P53114	1132 aa		0.66	□□□□□ -2.3
SKI7	YOR076C	SIS2	P36024	562 aa		0.65	□□□□□ -2.3
SKI7	YOR076C	TGL4	P36165	910 aa		0.65	□□□□□ -2.3
SKI7	YOR076C	YIL166C	P40445	542 aa		0.65	□□□□□ -2.3
SKI7	YOR076C	RSC4	Q02206	625 aa		0.65	□□□□□ -2.3
SKI7	YOR076C	SEG1	Q04279	960 aa		0.65	□□□□□ -2.3
SKI7	YOR076C	NPC2	Q12408	173 aa		0.65	□□□□□ -2.3
SKI7	YOR076C	TRP4	P07285	380 aa	Predicted RBP	0.65	□□□□□ -2.31
SKI7	YOR076C	ECM2	P38241	364 aa	Known RBP	0.65	□□□□□ -2.31
SKI7	YOR076C	BIM1	P40013	344 aa		0.65	□□□□□ -2.31
SKI7	YOR076C	NET1	P47035	1189 aa		0.65	□□□□□ -2.31
SKI7	YOR076C	VPS53	P47061	822 aa		0.65	□□□□□ -2.31
SKI7	YOR076C	YNR063W	P53749	607 aa		0.65	□□□□□ -2.31
SKI7	YOR076C	SVS1	Q12254	260 aa		0.65	□□□□□ -2.31
SKI7	YOR076C	PPS1	P38148	807 aa		0.64	□□□□□ -2.31
SKI7	YOR076C	POA1	P38218	177 aa		0.64	□□□□□ -2.31
SKI7	YOR076C	YHL017W	P38745	532 aa		0.64	□□□□□ -2.31
SKI7	YOR076C	PTP1	P25044	335 aa		0.64	□□□□□ -2.31
SKI7	YOR076C	RRN6	P32786	894 aa		0.64	□□□□□ -2.31
SKI7	YOR076C	RPN3	P40016	523 aa	Known RBP	0.64	□□□□□ -2.31
SKI7	YOR076C	LSO1	Q3E827	93 aa		0.64	□□□□□ -2.31
SKI7	YOR076C	FLP1	P03870	423 aa		0.63	□□□□□ -2.31
SKI7	YOR076C	LTP1	P40347	161 aa		0.63	□□□□□ -2.31
SKI7	YOR076C	NCS6	P53088	359 aa		0.63	□□□□□ -2.31
SKI7	YOR076C	NOG1	Q02892	647 aa	Known RBP	0.63	□□□□□ -2.31
SKI7	YOR076C	PUF6	Q04373	656 aa	Known RBP	0.63	□□□□□ -2.31
SKI7	YOR076C	AFG2	P32794	780 aa		0.62	□□□□□ -2.31
SKI7	YOR076C	MAF1	P41910	395 aa		0.62	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms