RNA–Protein interactions for RNA: YKL118W

YKL118W, Transcript of Dubious open reading frame, yeast

Gene YKL118W, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL118W	YKL118W	HCM1	P25364	564 aa		4.2	□□□□□ -1.74
YKL118W	YKL118W	CDC20	P26309	610 aa		4.2	□□□□□ -1.74
YKL118W	YKL118W	MET4	P32389	672 aa		4.2	□□□□□ -1.74
YKL118W	YKL118W	YPT53	P36019	220 aa		4.2	□□□□□ -1.74
YKL118W	YKL118W	GAL10	P04397	699 aa		4.19	□□□□□ -1.74
YKL118W	YKL118W	SRM1	P21827	482 aa		4.19	□□□□□ -1.74
YKL118W	YKL118W	STE11	P23561	717 aa		4.19	□□□□□ -1.74
YKL118W	YKL118W	LST4	P34239	828 aa		4.19	□□□□□ -1.74
YKL118W	YKL118W	ALG3	P38179	458 aa		4.19	□□□□□ -1.74
YKL118W	YKL118W	FAA3	P39002	694 aa		4.19	□□□□□ -1.74
YKL118W	YKL118W	RPN3	P40016	523 aa	Known RBP	4.19	□□□□□ -1.74
YKL118W	YKL118W	RSM24	Q03976	319 aa		4.19	□□□□□ -1.74
YKL118W	YKL118W	RXT3	Q07458	294 aa		4.19	□□□□□ -1.74
YKL118W	YKL118W	ACK1	Q07622	623 aa	Predicted RBP	4.19	□□□□□ -1.74
YKL118W	YKL118W	CMP2	P14747	604 aa		4.18	□□□□□ -1.74
YKL118W	YKL118W	MNN10	P50108	393 aa	Known RBP	4.18	□□□□□ -1.74
YKL118W	YKL118W	MCM6	P53091	1017 aa	Known RBP	4.18	□□□□□ -1.74
YKL118W	YKL118W	SUN4	P53616	420 aa		4.18	□□□□□ -1.74
YKL118W	YKL118W	TMA10	Q06177	86 aa		4.18	□□□□□ -1.74
YKL118W	YKL118W	OXR1	Q08952	273 aa		4.18	□□□□□ -1.74
YKL118W	YKL118W	CDC6	P09119	513 aa		4.17	□□□□□ -1.74
YKL118W	YKL118W	RFC5	P38251	354 aa		4.17	□□□□□ -1.74
YKL118W	YKL118W	PIC2	P40035	300 aa		4.17	□□□□□ -1.74
YKL118W	YKL118W	GPB1	Q08886	897 aa		4.17	□□□□□ -1.74
YKL118W	YKL118W	YPL260W	Q08977	551 aa		4.17	□□□□□ -1.74
YKL118W	YKL118W	NTO1	Q12311	748 aa		4.17	□□□□□ -1.74
YKL118W	YKL118W	RIB2	Q12362	591 aa	Known RBP	4.17	□□□□□ -1.74
YKL118W	YKL118W	YFL054C	P43549	646 aa		4.16	□□□□□ -1.74
YKL118W	YKL118W	HXK1	P04806	485 aa	Known RBP	4.15	□□□□□ -1.75
YKL118W	YKL118W	PMI40	P29952	429 aa	Known RBP	4.15	□□□□□ -1.75
YKL118W	YKL118W	PPX1	P38698	397 aa		4.15	□□□□□ -1.75
YKL118W	YKL118W	AIM21	P40563	679 aa		4.15	□□□□□ -1.75
YKL118W	YKL118W	PBP1	P53297	722 aa	Known RBP	4.15	□□□□□ -1.75
YKL118W	YKL118W	RAT1	Q02792	1006 aa	Known RBP	4.15	□□□□□ -1.75
YKL118W	YKL118W	WHI5	Q12416	295 aa		4.15	□□□□□ -1.75
YKL118W	YKL118W	VPS62	P53285	467 aa		4.14	□□□□□ -1.75
YKL118W	YKL118W	CTF4	Q01454	927 aa		4.14	□□□□□ -1.75
YKL118W	YKL118W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
YKL118W	YKL118W	TAF13	P11747	167 aa		4.13	□□□□□ -1.75
YKL118W	YKL118W	RPT1	P33299	467 aa	Known RBP	4.13	□□□□□ -1.75
YKL118W	YKL118W	CHS7	P38843	316 aa		4.13	□□□□□ -1.75
YKL118W	YKL118W	PHO23	P50947	330 aa		4.13	□□□□□ -1.75
YKL118W	YKL118W	ROD1	Q02805	837 aa		4.13	□□□□□ -1.75
YKL118W	YKL118W	YAP6	Q03935	383 aa		4.13	□□□□□ -1.75
YKL118W	YKL118W	URN1	Q06525	465 aa	Known RBP	4.13	□□□□□ -1.75
YKL118W	YKL118W	KIN2	P13186	1147 aa	Known RBP	4.12	□□□□□ -1.75
YKL118W	YKL118W	SSF1	P38789	453 aa	Predicted RBP	4.12	□□□□□ -1.75
YKL118W	YKL118W	THI12	P42883	340 aa		4.12	□□□□□ -1.75
YKL118W	YKL118W	THI5	P43534	340 aa		4.12	□□□□□ -1.75
YKL118W	YKL118W	THI11	P47183	340 aa		4.12	□□□□□ -1.75
YKL118W	YKL118W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
YKL118W	YKL118W	YLR224W	Q05947	369 aa		4.12	□□□□□ -1.75
YKL118W	YKL118W	THI13	Q07748	340 aa		4.12	□□□□□ -1.75
YKL118W	YKL118W	SVS1	Q12254	260 aa		4.12	□□□□□ -1.75
YKL118W	YKL118W	PMA1	P05030	918 aa	Known RBP	4.11	□□□□□ -1.75
YKL118W	YKL118W	RAD53	P22216	821 aa		4.11	□□□□□ -1.75
YKL118W	YKL118W	MKK2	P32491	506 aa		4.11	□□□□□ -1.75
YKL118W	YKL118W	GTF1	P53260	183 aa	Predicted RBP	4.11	□□□□□ -1.75
YKL118W	YKL118W	SIZ1	Q04195	904 aa		4.11	□□□□□ -1.75
YKL118W	YKL118W	MSC6	Q08818	692 aa	Known RBP	4.11	□□□□□ -1.75
YKL118W	YKL118W	HMI1	Q12039	706 aa		4.11	□□□□□ -1.75
YKL118W	YKL118W	YER152C	P10356	443 aa		4.1	□□□□□ -1.75
YKL118W	YKL118W	EMC1	P25574	760 aa		4.1	□□□□□ -1.75
YKL118W	YKL118W	APL1	P27351	700 aa		4.1	□□□□□ -1.75
YKL118W	YKL118W	DCG1	P32460	244 aa		4.09	□□□□□ -1.75
YKL118W	YKL118W	RGD1	P38339	666 aa		4.09	□□□□□ -1.75
YKL118W	YKL118W	STM1	P39015	273 aa	Known RBP	4.09	□□□□□ -1.75
YKL118W	YKL118W	GCV2	P49095	1034 aa		4.09	□□□□□ -1.75
YKL118W	YKL118W	SIW14	P53965	281 aa		4.09	□□□□□ -1.75
YKL118W	YKL118W	KIN4	Q01919	800 aa		4.09	□□□□□ -1.75
YKL118W	YKL118W	PRE9	P23638	258 aa	Known RBP	4.08	□□□□□ -1.76
YKL118W	YKL118W	DEF1	P35732	738 aa	Known RBP	4.08	□□□□□ -1.76
YKL118W	YKL118W	YML122C	Q03207	126 aa		4.08	□□□□□ -1.76
YKL118W	YKL118W	ATG13	Q06628	738 aa		4.08	□□□□□ -1.76
YKL118W	YKL118W	NOP12	Q08208	459 aa	Known RBP	4.08	□□□□□ -1.76
YKL118W	YKL118W	MLS1	P30952	554 aa		4.07	□□□□□ -1.76
YKL118W	YKL118W	MSS4	P38994	779 aa		4.07	□□□□□ -1.76
YKL118W	YKL118W	HXT13	P39924	564 aa		4.07	□□□□□ -1.76
YKL118W	YKL118W	ENT3	P47160	408 aa		4.07	□□□□□ -1.76
YKL118W	YKL118W	HXT17	P53631	564 aa		4.07	□□□□□ -1.76
YKL118W	YKL118W	HXT15	P54854	567 aa		4.07	□□□□□ -1.76
YKL118W	YKL118W	MSC2	Q03455	724 aa		4.07	□□□□□ -1.76
YKL118W	YKL118W	MCD1	Q12158	566 aa		4.07	□□□□□ -1.76
YKL118W	YKL118W	SYP1	P25623	870 aa	Known RBP	4.06	□□□□□ -1.76
YKL118W	YKL118W	MRPS18	P42847	217 aa		4.06	□□□□□ -1.76
YKL118W	YKL118W	GNP1	P48813	663 aa		4.06	□□□□□ -1.76
YKL118W	YKL118W	YGR122W	P53272	402 aa		4.06	□□□□□ -1.76
YKL118W	YKL118W	BAS1	P22035	811 aa		4.05	□□□□□ -1.76
YKL118W	YKL118W	SEC8	P32855	1065 aa		4.05	□□□□□ -1.76
YKL118W	YKL118W	PLB1	P39105	664 aa		4.05	□□□□□ -1.76
YKL118W	YKL118W	SIP5	P40210	489 aa	Known RBP	4.05	□□□□□ -1.76
YKL118W	YKL118W	CNN1	P43618	361 aa		4.05	□□□□□ -1.76
YKL118W	YKL118W	MRL1	Q06815	381 aa		4.05	□□□□□ -1.76
YKL118W	YKL118W	DBP5	P20449	482 aa	Known RBP	4.04	□□□□□ -1.76
YKL118W	YKL118W	ACE2	P21192	770 aa		4.04	□□□□□ -1.76
YKL118W	YKL118W	RAD2	P07276	1031 aa		4.03	□□□□□ -1.76
YKL118W	YKL118W	PEP7	P32609	515 aa		4.03	□□□□□ -1.76
YKL118W	YKL118W	MND2	P40577	368 aa		4.03	□□□□□ -1.76
YKL118W	YKL118W	UGA2	P38067	497 aa		4.02	□□□□□ -1.77
YKL118W	YKL118W	IPL1	P38991	367 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 106.5 ms