RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C TAT2P38967 592 aa6.4□□□□□ -1.38
CTK2YJL006C MPT5P39016 859 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
CTK2YJL006C PIK1P39104 1066 aa6.4□□□□□ -1.38
CTK2YJL006C ROT1Q03691 256 aa6.4□□□□□ -1.38
CTK2YJL006C TUB2P02557 457 aaKnown RBP6.39□□□□□ -1.39
CTK2YJL006C PUF4P25339 888 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
CTK2YJL006C SNF5P18480 905 aa6.38□□□□□ -1.39
CTK2YJL006C RPN3P40016 523 aaKnown RBP6.38□□□□□ -1.39
CTK2YJL006C YPL260WQ08977 551 aa6.38□□□□□ -1.39
CTK2YJL006C PLB2Q03674 706 aa6.37□□□□□ -1.39
CTK2YJL006C TAF13P11747 167 aa6.36□□□□□ -1.39
CTK2YJL006C RAT1Q02792 1006 aaKnown RBP6.35□□□□□ -1.39
CTK2YJL006C ROD1Q02805 837 aa6.35□□□□□ -1.39
CTK2YJL006C RSM24Q03976 319 aa6.35□□□□□ -1.39
CTK2YJL006C DUS4Q06063 367 aa6.35□□□□□ -1.39
CTK2YJL006C MRPS18P42847 217 aa6.34□□□□□ -1.39
CTK2YJL006C MCD1Q12158 566 aa6.34□□□□□ -1.39
CTK2YJL006C CMP2P14747 604 aa6.33□□□□□ -1.4
CTK2YJL006C RFC5P38251 354 aa6.33□□□□□ -1.4
CTK2YJL006C PNS1Q12412 539 aa6.33□□□□□ -1.4
CTK2YJL006C GAL10P04397 699 aa6.32□□□□□ -1.4
CTK2YJL006C PRE9P23638 258 aaKnown RBP6.32□□□□□ -1.4
CTK2YJL006C SEC20P28791 383 aa6.32□□□□□ -1.4
CTK2YJL006C YFL054CP43549 646 aa6.32□□□□□ -1.4
CTK2YJL006C SRM1P21827 482 aa6.31□□□□□ -1.4
CTK2YJL006C MKK2P32491 506 aa6.31□□□□□ -1.4
CTK2YJL006C DOM34P33309 386 aa6.31□□□□□ -1.4
CTK2YJL006C IPL1P38991 367 aa6.31□□□□□ -1.4
CTK2YJL006C YGR122WP53272 402 aa6.31□□□□□ -1.4
CTK2YJL006C SIW14P53965 281 aa6.31□□□□□ -1.4
CTK2YJL006C GIS1Q03833 894 aa6.31□□□□□ -1.4
CTK2YJL006C RXT3Q07458 294 aa6.3□□□□□ -1.4
CTK2YJL006C ACK1Q07622 623 aaPredicted RBP6.29□□□□□ -1.4
CTK2YJL006C YER152CP10356 443 aa6.28□□□□□ -1.4
CTK2YJL006C CDC20P26309 610 aa6.28□□□□□ -1.4
CTK2YJL006C SEC8P32855 1065 aa6.28□□□□□ -1.4
CTK2YJL006C TRM2P33753 639 aa6.28□□□□□ -1.4
CTK2YJL006C RGD1P38339 666 aa6.28□□□□□ -1.4
CTK2YJL006C ENT3P47160 408 aa6.28□□□□□ -1.4
CTK2YJL006C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
CTK2YJL006C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
CTK2YJL006C GPB1Q08886 897 aa6.28□□□□□ -1.4
CTK2YJL006C SVS1Q12254 260 aa6.28□□□□□ -1.4
CTK2YJL006C RAD2P07276 1031 aa6.27□□□□□ -1.41
CTK2YJL006C KIN2P13186 1147 aaKnown RBP6.27□□□□□ -1.41
CTK2YJL006C SYP1P25623 870 aaKnown RBP6.27□□□□□ -1.41
CTK2YJL006C RIB2Q12362 591 aaKnown RBP6.27□□□□□ -1.41
CTK2YJL006C APL1P27351 700 aa6.26□□□□□ -1.41
CTK2YJL006C MLS1P30952 554 aa6.26□□□□□ -1.41
CTK2YJL006C HXT13P39924 564 aa6.26□□□□□ -1.41
CTK2YJL006C RPS26AP39938 119 aaKnown RBP6.26□□□□□ -1.41
CTK2YJL006C RPS26BP39939 119 aaKnown RBP6.26□□□□□ -1.41
CTK2YJL006C PBP1P53297 722 aaKnown RBP6.26□□□□□ -1.41
CTK2YJL006C HXT17P53631 564 aa6.26□□□□□ -1.41
CTK2YJL006C HXT15P54854 567 aa6.26□□□□□ -1.41
CTK2YJL006C TMA10Q06177 86 aa6.26□□□□□ -1.41
CTK2YJL006C MRL1Q06815 381 aa6.26□□□□□ -1.41
CTK2YJL006C PUS9Q12069 462 aa6.26□□□□□ -1.41
CTK2YJL006C LST4P34239 828 aa6.25□□□□□ -1.41
CTK2YJL006C GNP1P48813 663 aa6.25□□□□□ -1.41
CTK2YJL006C MNN10P50108 393 aaKnown RBP6.25□□□□□ -1.41
CTK2YJL006C MCM6P53091 1017 aaKnown RBP6.25□□□□□ -1.41
CTK2YJL006C CDC6P09119 513 aa6.24□□□□□ -1.41
CTK2YJL006C CYC8P14922 966 aa6.24□□□□□ -1.41
CTK2YJL006C HCM1P25364 564 aa6.24□□□□□ -1.41
CTK2YJL006C CNN1P43618 361 aa6.24□□□□□ -1.41
CTK2YJL006C MSE1P48525 536 aa6.23□□□□□ -1.41
CTK2YJL006C GTF1P53260 183 aaPredicted RBP6.23□□□□□ -1.41
CTK2YJL006C GCR1P07261 785 aa6.22□□□□□ -1.41
CTK2YJL006C DBP5P20449 482 aaKnown RBP6.22□□□□□ -1.41
CTK2YJL006C STE11P23561 717 aa6.22□□□□□ -1.41
CTK2YJL006C TAD3Q9URQ3 322 aa6.22□□□□□ -1.41
CTK2YJL006C BAS1P22035 811 aa6.2□□□□□ -1.42
CTK2YJL006C VPS62P53285 467 aa6.2□□□□□ -1.42
CTK2YJL006C SEN54Q02825 467 aaPredicted RBP6.2□□□□□ -1.42
CTK2YJL006C YAP6Q03935 383 aa6.2□□□□□ -1.42
CTK2YJL006C SIZ1Q04195 904 aa6.2□□□□□ -1.42
CTK2YJL006C ATG13Q06628 738 aa6.2□□□□□ -1.42
CTK2YJL006C MCM2P29469 868 aa6.19□□□□□ -1.42
CTK2YJL006C SLD2P34252 453 aa6.19□□□□□ -1.42
CTK2YJL006C MPH1P40562 993 aa6.19□□□□□ -1.42
CTK2YJL006C GCV2P49095 1034 aa6.19□□□□□ -1.42
CTK2YJL006C SUN4P53616 420 aa6.19□□□□□ -1.42
CTK2YJL006C YLR224WQ05947 369 aa6.19□□□□□ -1.42
CTK2YJL006C NTO1Q12311 748 aa6.19□□□□□ -1.42
CTK2YJL006C MGE1P38523 228 aa6.18□□□□□ -1.42
CTK2YJL006C SLI1P53304 468 aa6.18□□□□□ -1.42
CTK2YJL006C MSC2Q03455 724 aa6.18□□□□□ -1.42
CTK2YJL006C EMC1P25574 760 aa6.17□□□□□ -1.42
CTK2YJL006C UGA2P38067 497 aa6.17□□□□□ -1.42
CTK2YJL006C MXR1P40029 184 aa6.17□□□□□ -1.42
CTK2YJL006C PHO23P50947 330 aa6.17□□□□□ -1.42
CTK2YJL006C HMI1Q12039 706 aa6.17□□□□□ -1.42
CTK2YJL006C ACE2P21192 770 aa6.16□□□□□ -1.42
CTK2YJL006C RAD27P26793 382 aa6.15□□□□□ -1.42
CTK2YJL006C PMI40P29952 429 aaKnown RBP6.15□□□□□ -1.42
CTK2YJL006C RER2P35196 286 aa6.15□□□□□ -1.42
CTK2YJL006C MCM7P38132 845 aa6.15□□□□□ -1.42
CTK2YJL006C ACM1Q08981 209 aa6.15□□□□□ -1.42
CTK2YJL006C RPL11AP0C0W9 174 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms