RNA–Protein interactions for RNA: YGR296W

YRF1-3, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-3, Length 5,580 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3YGR296W EMP47P43555 445 aa8.58□□□□□ -1.04
YRF1-3YGR296W SET2P46995 733 aaKnown RBP8.58□□□□□ -1.04
YRF1-3YGR296W RAD61Q99359 647 aa8.58□□□□□ -1.04
YRF1-3YGR296W RPS9BP05755 195 aaKnown RBP8.57□□□□□ -1.04
YRF1-3YGR296W YML082WQ04533 649 aaKnown RBP8.57□□□□□ -1.04
YRF1-3YGR296W VAC14Q06708 880 aa8.57□□□□□ -1.04
YRF1-3YGR296W NUP188P52593 1655 aaKnown RBP8.57□□□□□ -1.04
YRF1-3YGR296W MET6P05694 767 aaKnown RBP8.57□□□□□ -1.04
YRF1-3YGR296W YNL144CP53907 740 aa8.57□□□□□ -1.04
YRF1-3YGR296W YDR306CQ06640 478 aa8.57□□□□□ -1.04
YRF1-3YGR296W RNR3P21672 869 aaKnown RBP8.57□□□□□ -1.04
YRF1-3YGR296W MMR1Q06324 491 aa8.57□□□□□ -1.04
YRF1-3YGR296W ISW1P38144 1129 aa8.57□□□□□ -1.04
YRF1-3YGR296W VTC2P43585 828 aa8.57□□□□□ -1.04
YRF1-3YGR296W RKM2Q03942 479 aa8.57□□□□□ -1.04
YRF1-3YGR296W TY1B-DR3Q99231 1755 aa8.57□□□□□ -1.04
YRF1-3YGR296W ATE1P16639 503 aa8.56□□□□□ -1.04
YRF1-3YGR296W GSY2P27472 705 aa8.56□□□□□ -1.04
YRF1-3YGR296W TAF10Q12030 206 aa8.56□□□□□ -1.04
YRF1-3YGR296W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.56□□□□□ -1.04not detected
YRF1-3YGR296W MAK31P23059 88 aa8.56□□□□□ -1.04
YRF1-3YGR296W YPT11P48559 417 aa8.56□□□□□ -1.04
YRF1-3YGR296W YOR111WQ99210 232 aa8.56□□□□□ -1.04
YRF1-3YGR296W DDP1Q99321 188 aaKnown RBP8.56□□□□□ -1.04
YRF1-3YGR296W SBE2P42223 864 aaKnown RBP8.56□□□□□ -1.04
YRF1-3YGR296W YGL140CP53120 1219 aa8.56□□□□□ -1.04
YRF1-3YGR296W IRC4Q03036 179 aa8.56□□□□□ -1.04
YRF1-3YGR296W SRP40P32583 406 aaPredicted RBP8.56□□□□□ -1.04
YRF1-3YGR296W NPL4P33755 580 aa8.56□□□□□ -1.04
YRF1-3YGR296W SSP1P38871 571 aa8.56□□□□□ -1.04
YRF1-3YGR296W JIP5Q06214 492 aaPredicted RBP8.56□□□□□ -1.04
YRF1-3YGR296W PGM1P33401 570 aaKnown RBP8.56□□□□□ -1.04
YRF1-3YGR296W PFF1P38244 976 aa8.56□□□□□ -1.04
YRF1-3YGR296W ILV3P39522 585 aaKnown RBP8.56□□□□□ -1.04
YRF1-3YGR296W INA22P40576 216 aa8.56□□□□□ -1.04
YRF1-3YGR296W HYR1P40581 163 aaKnown RBP8.56□□□□□ -1.04
YRF1-3YGR296W BUD31P25337 157 aaPredicted RBP8.55□□□□□ -1.04
YRF1-3YGR296W PTH2P34222 208 aa8.55□□□□□ -1.04
YRF1-3YGR296W RRP14P36080 434 aaKnown RBP8.55□□□□□ -1.04
YRF1-3YGR296W CBP1P07252 654 aa8.55□□□□□ -1.04
YRF1-3YGR296W SWI4P25302 1093 aaKnown RBP8.55□□□□□ -1.04
YRF1-3YGR296W GYP6P32806 458 aa8.55□□□□□ -1.04
YRF1-3YGR296W GPT2P36148 743 aa8.55□□□□□ -1.04
YRF1-3YGR296W YLR455WQ06188 304 aa8.55□□□□□ -1.04
YRF1-3YGR296W NYV1Q12255 253 aa8.55□□□□□ -1.04
YRF1-3YGR296W RPO26P20435 155 aa8.55□□□□□ -1.04
YRF1-3YGR296W UBP9P39967 754 aa8.55□□□□□ -1.04
YRF1-3YGR296W SEC5P89102 971 aa8.55□□□□□ -1.04
YRF1-3YGR296W YBT1P32386 1661 aa8.55□□□□□ -1.04
YRF1-3YGR296W REV7P38927 245 aa8.55□□□□□ -1.04
YRF1-3YGR296W YGR273CP53329 174 aa8.55□□□□□ -1.04
YRF1-3YGR296W RPC25P35718 212 aa8.54□□□□□ -1.04
YRF1-3YGR296W GRX7P38068 203 aa8.54□□□□□ -1.04
YRF1-3YGR296W SEC9P40357 651 aa8.54□□□□□ -1.04
YRF1-3YGR296W STI1P15705 589 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04 RIP-Chip
YRF1-3YGR296W ADP1P25371 1049 aa8.54□□□□□ -1.04
YRF1-3YGR296W BMH1P29311 267 aaKnown RBP8.54□□□□□ -1.04
YRF1-3YGR296W SMY1P32364 656 aaKnown RBP8.54□□□□□ -1.04
YRF1-3YGR296W MAK5P38112 773 aaPredicted RBP8.54□□□□□ -1.04
YRF1-3YGR296W KTR5P53966 522 aaPredicted RBP8.54□□□□□ -1.04
YRF1-3YGR296W TUM1Q08686 304 aaKnown RBP8.54□□□□□ -1.04
YRF1-3YGR296W MED1Q12321 566 aa8.54□□□□□ -1.04
YRF1-3YGR296W DBF4P32325 704 aa8.54□□□□□ -1.04
YRF1-3YGR296W CNS1P33313 385 aa8.54□□□□□ -1.04
YRF1-3YGR296W ICP55P40051 511 aa8.54□□□□□ -1.04
YRF1-3YGR296W FOX2Q02207 900 aaKnown RBP8.54□□□□□ -1.04
YRF1-3YGR296W UTP6Q02354 440 aaKnown RBP8.54□□□□□ -1.04
YRF1-3YGR296W CRD1Q07560 283 aa8.54□□□□□ -1.04
YRF1-3YGR296W SKG6P32900 734 aaPredicted RBP8.54□□□□□ -1.04
YRF1-3YGR296W WAR1Q03631 944 aa8.54□□□□□ -1.04
YRF1-3YGR296W RPB2P08518 1224 aaKnown RBP8.54□□□□□ -1.04
YRF1-3YGR296W NCS2P53923 493 aaPredicted RBP8.54□□□□□ -1.04
YRF1-3YGR296W MEI5P32489 222 aa8.53□□□□□ -1.04
YRF1-3YGR296W RRN6P32786 894 aa8.53□□□□□ -1.04
YRF1-3YGR296W STE20Q03497 939 aaKnown RBP8.53□□□□□ -1.04
YRF1-3YGR296W ADY3Q07732 790 aa8.53□□□□□ -1.04
YRF1-3YGR296W RTP1Q12751 981 aa8.53□□□□□ -1.04
YRF1-3YGR296W SSB1P11484 613 aaKnown RBP8.53□□□□□ -1.04
YRF1-3YGR296W SSB2P40150 613 aaKnown RBP8.53□□□□□ -1.04
YRF1-3YGR296W TY1B-AO13527 1196 aaKnown RBP8.52□□□□□ -1.04
YRF1-3YGR296W COQ1P18900 473 aa8.52□□□□□ -1.04
YRF1-3YGR296W KIC1P38692 1080 aa8.52□□□□□ -1.04
YRF1-3YGR296W POM152P39685 1337 aa8.52□□□□□ -1.04
YRF1-3YGR296W AI2P03876 854 aa8.52□□□□□ -1.05
YRF1-3YGR296W NDI1P32340 513 aa8.52□□□□□ -1.05
YRF1-3YGR296W MFM1Q02783 413 aa8.52□□□□□ -1.05
YRF1-3YGR296W CDC60P26637 1090 aaKnown RBP8.52□□□□□ -1.05
YRF1-3YGR296W BFR1P38934 470 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
YRF1-3YGR296W LRE1P25579 583 aaKnown RBP8.52□□□□□ -1.05
YRF1-3YGR296W CBR1P38626 284 aaKnown RBP8.52□□□□□ -1.05
YRF1-3YGR296W GPI13Q07830 1017 aa8.52□□□□□ -1.05
YRF1-3YGR296W ECM2P38241 364 aaKnown RBP8.51□□□□□ -1.05
YRF1-3YGR296W TIF4631P39935 952 aaKnown RBP8.51□□□□□ -1.05
YRF1-3YGR296W YML6P51998 286 aa8.51□□□□□ -1.05
YRF1-3YGR296W UME1Q03010 460 aa8.51□□□□□ -1.05
YRF1-3YGR296W RGA2Q06407 1009 aa8.51□□□□□ -1.05
YRF1-3YGR296W SMY2P32909 740 aaKnown RBP8.51□□□□□ -1.05
YRF1-3YGR296W URB2P47108 1174 aa8.51□□□□□ -1.05
YRF1-3YGR296W UBC1P21734 215 aaKnown RBP8.51□□□□□ -1.05
YRF1-3YGR296W TY4A-JP47023 414 aa8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms