RNA–Protein interactions for RNA: YGR038C-B

YGR038C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR038C-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-BYGR038C-B STB3Q12427 513 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B CSR2Q12734 1121 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B SRO9P25567 434 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B PAT1P25644 796 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B CDC11P32458 415 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B NIC96P34077 839 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B KTR4P38131 464 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B ALF1P53904 254 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B NAN1Q02931 896 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B TSR3Q12094 313 aaKnown RBP2.88□□□□□ -1.95
YGR038C-BYGR038C-B SMC6Q12749 1114 aa2.88□□□□□ -1.95
YGR038C-BYGR038C-B GCD2P12754 651 aaPredicted RBP2.87□□□□□ -1.95
YGR038C-BYGR038C-B OXP1P28273 1286 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B JHD1P40034 492 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B MGA2P40578 1113 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B SDA1P53313 767 aaKnown RBP2.87□□□□□ -1.95
YGR038C-BYGR038C-B MSH6Q03834 1242 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B PSK2Q08217 1101 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B ALE1Q08548 619 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B HMI1Q12039 706 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B ESP1Q03018 1630 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B SGE1P33335 543 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B TRM2P33753 639 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B OPY1P38271 328 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B UBP7P40453 1071 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B ECL1P48235 211 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B UBP3Q01477 912 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
YGR038C-BYGR038C-B YDL144CQ07589 356 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B MDM35O60200 86 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B PTP1P25044 335 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B UBC6P33296 250 aaPredicted RBP2.87□□□□□ -1.95
YGR038C-BYGR038C-B NPL4P33755 580 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B ADD66P36040 267 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B TOM22P49334 152 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B NUT1P53114 1132 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B PRP3Q03338 469 aaPredicted RBP2.87□□□□□ -1.95
YGR038C-BYGR038C-B LCD1Q04377 747 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B PCL8Q08966 492 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B LAP2Q10740 671 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B AIM44Q99299 758 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B MST1P07236 462 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B DBP3P20447 523 aaKnown RBP2.87□□□□□ -1.95
YGR038C-BYGR038C-B PUP3P25451 205 aaKnown RBP2.87□□□□□ -1.95
YGR038C-BYGR038C-B SAP190P36123 1033 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B APM3P38153 483 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B IES1P43579 692 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B YJL007CP47080 104 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B DSD1P53095 428 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B TGL2P54857 326 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B YLR271WQ06152 274 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B SPE3Q12074 293 aaKnown RBP2.87□□□□□ -1.95
YGR038C-BYGR038C-B GLE1Q12315 538 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B GYP5Q12344 894 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B AHC1Q12433 566 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B RPA190P10964 1664 aaKnown RBP2.87□□□□□ -1.95
YGR038C-BYGR038C-B ULS1Q08562 1619 aa2.87□□□□□ -1.95
YGR038C-BYGR038C-B IML1P47170 1584 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B BIK1P11709 440 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B CBS2P14905 389 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B DTR1P38125 572 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B SMF1P38925 575 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B TFG2P41896 400 aaPredicted RBP2.86□□□□□ -1.95
YGR038C-BYGR038C-B SEC39Q12745 709 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B RNR2P09938 399 aaKnown RBP2.86□□□□□ -1.95
YGR038C-BYGR038C-B CPS1P27614 576 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B SYH1Q02875 849 aaKnown RBP2.86□□□□□ -1.95
YGR038C-BYGR038C-B SLD5Q03406 294 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B SEG2P34250 1132 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B EAP1P36041 632 aaKnown RBP2.86□□□□□ -1.95
YGR038C-BYGR038C-B PTP3P40048 928 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B CTR9P89105 1077 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B ATG9Q12142 997 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B PGA3Q12746 312 aaKnown RBP2.86□□□□□ -1.95
YGR038C-BYGR038C-B AI4P03878 556 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B NOT3P06102 836 aaKnown RBP2.86□□□□□ -1.95
YGR038C-BYGR038C-B SPO16P17122 198 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B PHO87P25360 923 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B SKT5P34226 696 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B SPC97P38863 823 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B GCV1P48015 400 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B SAP4P53036 818 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B HRD3Q05787 833 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B PIG1Q06216 648 aa2.86□□□□□ -1.95
YGR038C-BYGR038C-B BMS1Q08965 1183 aaKnown RBP2.86□□□□□ -1.95
YGR038C-BYGR038C-B CYB2P00175 591 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B KIN1P13185 1064 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B IMG2P25642 146 aaPredicted RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B HMT1P38074 348 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B YHL026CP38740 315 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B RTT107P38850 1070 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B KEL1P38853 1164 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B ESL1P40456 1118 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B FET5P43561 622 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B MTD1Q02046 320 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B IVY1Q04934 453 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B CHO2P05374 869 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B PDC1P06169 563 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B ADP1P25371 1049 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B LRE1P25579 583 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B EUG1P32474 517 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms