RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHD1	YER164W	SUE1	Q06524	206 aa		4.09	□□□□□ -1.76
CHD1	YER164W	PIF1	P07271	859 aa		4.08	□□□□□ -1.76
CHD1	YER164W	MTF2	P10849	440 aa		4.08	□□□□□ -1.76
CHD1	YER164W	PDR1	P12383	1068 aa		4.08	□□□□□ -1.76
CHD1	YER164W	RPC19	P28000	142 aa	Known RBP	4.08	□□□□□ -1.76
CHD1	YER164W	AFG2	P32794	780 aa		4.08	□□□□□ -1.76
CHD1	YER164W	ELM1	P32801	640 aa		4.08	□□□□□ -1.76
CHD1	YER164W	PCH2	P38126	564 aa		4.08	□□□□□ -1.76
CHD1	YER164W	VPS4	P52917	437 aa		4.08	□□□□□ -1.76
CHD1	YER164W	LSG1	P53145	640 aa	Known RBP	4.08	□□□□□ -1.76
CHD1	YER164W	HFD1	Q04458	532 aa		4.08	□□□□□ -1.76
CHD1	YER164W	VPS38	Q05919	439 aa		4.08	□□□□□ -1.76
CHD1	YER164W	SSF2	Q12153	453 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD1	YER164W	DDP1	Q99321	188 aa	Known RBP	4.08	□□□□□ -1.76
CHD1	YER164W	PUP2	P32379	260 aa		4.08	□□□□□ -1.76
CHD1	YER164W	MED8	P38304	223 aa		4.08	□□□□□ -1.76
CHD1	YER164W	VPS75	P53853	264 aa		4.08	□□□□□ -1.76
CHD1	YER164W	BET4	Q00618	327 aa		4.08	□□□□□ -1.76
CHD1	YER164W	PTA1	Q01329	785 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD1	YER164W	KIN4	Q01919	800 aa		4.08	□□□□□ -1.76
CHD1	YER164W	YOL075C	Q08234	1294 aa		4.08	□□□□□ -1.76
CHD1	YER164W	ATG9	Q12142	997 aa		4.08	□□□□□ -1.76
CHD1	YER164W	PTC5	Q12511	572 aa		4.08	□□□□□ -1.76
CHD1	YER164W	CHS3	P29465	1165 aa		4.08	□□□□□ -1.76
CHD1	YER164W	MYO3	P36006	1272 aa		4.08	□□□□□ -1.76
CHD1	YER164W	ALD2	P47771	506 aa		4.08	□□□□□ -1.76
CHD1	YER164W	COG4	Q06096	861 aa		4.08	□□□□□ -1.76
CHD1	YER164W	SDH5	Q08230	162 aa		4.08	□□□□□ -1.76
CHD1	YER164W	SRP54	P20424	541 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	MAK31	P23059	88 aa		4.07	□□□□□ -1.76
CHD1	YER164W	GSY2	P27472	705 aa		4.07	□□□□□ -1.76
CHD1	YER164W	YME2	P32843	850 aa		4.07	□□□□□ -1.76
CHD1	YER164W	CNS1	P33313	385 aa		4.07	□□□□□ -1.76
CHD1	YER164W	HEL1	P36113	551 aa		4.07	□□□□□ -1.76
CHD1	YER164W	TIF4631	P39935	952 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	PUS6	P53294	404 aa		4.07	□□□□□ -1.76
CHD1	YER164W	ZPR1	P53303	486 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	SMD2	Q06217	110 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	ATG17	Q06410	417 aa		4.07	□□□□□ -1.76
CHD1	YER164W	RAD3	P06839	778 aa		4.07	□□□□□ -1.76
CHD1	YER164W	SWI6	P09959	803 aa		4.07	□□□□□ -1.76
CHD1	YER164W	FZO1	P38297	855 aa		4.07	□□□□□ -1.76
CHD1	YER164W	MAD1	P40957	749 aa		4.07	□□□□□ -1.76
CHD1	YER164W	UBX2	Q04228	584 aa		4.07	□□□□□ -1.76
CHD1	YER164W	WRS1	Q12109	432 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	GET3	Q12154	354 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	MET6	P05694	767 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	RPB2	P08518	1224 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	NDT80	P38830	627 aa		4.07	□□□□□ -1.76
CHD1	YER164W	KAP123	P40069	1113 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	GRX3	Q03835	250 aa		4.07	□□□□□ -1.76
CHD1	YER164W	KEL3	Q08979	651 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD1	YER164W	APL4	Q12028	832 aa		4.07	□□□□□ -1.76
CHD1	YER164W	SAM2	P19358	384 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	UBC1	P21734	215 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	NUF2	P33895	451 aa		4.07	□□□□□ -1.76
CHD1	YER164W	SHM1	P37292	490 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD1	YER164W	CPR6	P53691	371 aa	Known RBP	4.07	□□□□□ -1.76
CHD1	YER164W	SML1	Q04964	104 aa		4.07	□□□□□ -1.76
CHD1	YER164W	NOC3	Q07896	663 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD1	YER164W	TUF1	P02992	437 aa	Known RBP	4.06	□□□□□ -1.76
CHD1	YER164W	PRT1	P06103	763 aa	Known RBP	4.06	□□□□□ -1.76
CHD1	YER164W	PDC1	P06169	563 aa	Known RBP	4.06	□□□□□ -1.76
CHD1	YER164W	RPS6A	P0CX37	236 aa	Known RBP	4.06	□□□□□ -1.76
CHD1	YER164W	RPS6B	P0CX38	236 aa	Predicted RBP	4.06	□□□□□ -1.76
CHD1	YER164W	KRS1	P15180	591 aa	Known RBP	4.06	□□□□□ -1.76
CHD1	YER164W	SIT4	P20604	311 aa		4.06	□□□□□ -1.76
CHD1	YER164W	FES1	P38260	290 aa		4.06	□□□□□ -1.76
CHD1	YER164W	IOC3	P43596	787 aa		4.06	□□□□□ -1.76
CHD1	YER164W	PRP42	Q03776	544 aa	Known RBP	4.06	□□□□□ -1.76
CHD1	YER164W	YPL260W	Q08977	551 aa		4.06	□□□□□ -1.76
CHD1	YER164W	FLO1	P32768	1537 aa		4.06	□□□□□ -1.76
CHD1	YER164W	ARG82	P07250	355 aa		4.06	□□□□□ -1.76
CHD1	YER164W	PSO2	P30620	661 aa		4.06	□□□□□ -1.76
CHD1	YER164W	VPS8	P39702	1274 aa		4.06	□□□□□ -1.76
CHD1	YER164W	NOP9	P47077	666 aa	Known RBP	4.06	□□□□□ -1.76
CHD1	YER164W	CTR1	P49573	406 aa		4.06	□□□□□ -1.76
CHD1	YER164W	PIP2	P52960	996 aa		4.06	□□□□□ -1.76
CHD1	YER164W	RTC4	P53850	401 aa		4.06	□□□□□ -1.76
CHD1	YER164W	OM45	P16547	393 aa		4.06	□□□□□ -1.76
CHD1	YER164W	YKU70	P32807	602 aa		4.06	□□□□□ -1.76
CHD1	YER164W	NIP100	P33420	868 aa		4.06	□□□□□ -1.76
CHD1	YER164W	ADE17	P38009	592 aa	Known RBP	4.06	□□□□□ -1.76
CHD1	YER164W	RXT2	P38255	430 aa		4.06	□□□□□ -1.76
CHD1	YER164W	VMA10	P48836	114 aa	Known RBP	4.06	□□□□□ -1.76
CHD1	YER164W	PXR1	P53335	271 aa	Predicted RBP	4.06	□□□□□ -1.76
CHD1	YER164W	TRS120	Q04183	1289 aa		4.06	□□□□□ -1.76
CHD1	YER164W	OXR1	Q08952	273 aa		4.06	□□□□□ -1.76
CHD1	YER164W	PWP1	P21304	576 aa	Known RBP	4.05	□□□□□ -1.76
CHD1	YER164W	SEC65	P29478	273 aa		4.05	□□□□□ -1.76
CHD1	YER164W	EFB1	P32471	206 aa	Known RBP	4.05	□□□□□ -1.76
CHD1	YER164W	PFF1	P38244	976 aa		4.05	□□□□□ -1.76
CHD1	YER164W	SPP381	P38282	291 aa	Predicted RBP	4.05	□□□□□ -1.76
CHD1	YER164W	RTS1	P38903	757 aa		4.05	□□□□□ -1.76
CHD1	YER164W	YPT11	P48559	417 aa		4.05	□□□□□ -1.76
CHD1	YER164W	SPO16	P17122	198 aa		4.05	□□□□□ -1.76
CHD1	YER164W	RPC25	P35718	212 aa		4.05	□□□□□ -1.76
CHD1	YER164W	UGA2	P38067	497 aa		4.05	□□□□□ -1.76
CHD1	YER164W	ERG7	P38604	731 aa		4.05	□□□□□ -1.76
CHD1	YER164W	ORC6	P38826	435 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms