RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W PGA3Q12746 312 aaKnown RBP6.91□□□□□ -1.3
RPT3YDR394W DDP1Q99321 188 aaKnown RBP6.91□□□□□ -1.3
RPT3YDR394W DUR1,2P32528 1835 aaKnown RBP6.91□□□□□ -1.3
RPT3YDR394W UTP10P42945 1769 aaKnown RBP6.9□□□□□ -1.3
RPT3YDR394W PGI1P12709 554 aaKnown RBP6.9□□□□□ -1.3
RPT3YDR394W FRS2P15625 503 aaKnown RBP6.9□□□□□ -1.3
RPT3YDR394W RDS1P25611 832 aa6.9□□□□□ -1.3
RPT3YDR394W MGM1P32266 881 aa6.9□□□□□ -1.3
RPT3YDR394W MPE1P35728 441 aaKnown RBP6.9□□□□□ -1.3
RPT3YDR394W MIC60P36112 540 aa6.9□□□□□ -1.3
RPT3YDR394W MAL33P38157 468 aa6.9□□□□□ -1.3
RPT3YDR394W ICP55P40051 511 aa6.9□□□□□ -1.3
RPT3YDR394W FAR11P53917 953 aa6.9□□□□□ -1.3
RPT3YDR394W BDF2Q07442 638 aa6.9□□□□□ -1.3
RPT3YDR394W TRK2P28584 889 aa6.89□□□□□ -1.31
RPT3YDR394W DID4P36108 232 aa6.89□□□□□ -1.31
RPT3YDR394W MRPL10P36520 322 aa6.89□□□□□ -1.31
RPT3YDR394W RFT1P38206 574 aaPredicted RBP6.89□□□□□ -1.31
RPT3YDR394W RFC5P38251 354 aa6.89□□□□□ -1.31
RPT3YDR394W NPR3P38742 1146 aa6.89□□□□□ -1.31
RPT3YDR394W ACS2P52910 683 aaKnown RBP6.89□□□□□ -1.31
RPT3YDR394W EST2Q06163 884 aa6.89□□□□□ -1.31
RPT3YDR394W CBP3P21560 335 aa6.88□□□□□ -1.31
RPT3YDR394W PHO87P25360 923 aa6.88□□□□□ -1.31
RPT3YDR394W IRE1P32361 1115 aa6.88□□□□□ -1.31
RPT3YDR394W RER2P35196 286 aa6.88□□□□□ -1.31
RPT3YDR394W MNN4P36044 1178 aa6.88□□□□□ -1.31
RPT3YDR394W TOS1P38288 455 aa6.88□□□□□ -1.31
RPT3YDR394W ALD3P54114 506 aa6.88□□□□□ -1.31
RPT3YDR394W UBX2Q04228 584 aa6.88□□□□□ -1.31
RPT3YDR394W CTI6Q08923 506 aa6.88□□□□□ -1.31
RPT3YDR394W PSF3Q12146 194 aa6.88□□□□□ -1.31
RPT3YDR394W RPL22AP05749 121 aaKnown RBP6.87□□□□□ -1.31
RPT3YDR394W GRX7P38068 203 aa6.87□□□□□ -1.31
RPT3YDR394W RRP8P38961 392 aaKnown RBP6.87□□□□□ -1.31
RPT3YDR394W JJJ3P47138 172 aa6.87□□□□□ -1.31
RPT3YDR394W ENT3P47160 408 aa6.87□□□□□ -1.31
RPT3YDR394W LYS4P49367 693 aaPredicted RBP6.87□□□□□ -1.31
RPT3YDR394W LYS5P50113 272 aa6.87□□□□□ -1.31
RPT3YDR394W CTR9P89105 1077 aa6.87□□□□□ -1.31
RPT3YDR394W PPM2Q08282 695 aa6.87□□□□□ -1.31
RPT3YDR394W RPS31P05759 152 aaKnown RBP6.86□□□□□ -1.31
RPT3YDR394W MCM1P11746 286 aa6.86□□□□□ -1.31
RPT3YDR394W PFK2P16862 959 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
RPT3YDR394W COQ1P18900 473 aa6.86□□□□□ -1.31
RPT3YDR394W MCM2P29469 868 aa6.86□□□□□ -1.31
RPT3YDR394W ASF1P32447 279 aa6.86□□□□□ -1.31
RPT3YDR394W YPT11P48559 417 aa6.86□□□□□ -1.31
RPT3YDR394W INM2Q05533 292 aa6.86□□□□□ -1.31
RPT3YDR394W CYT1P07143 309 aa6.85□□□□□ -1.31
RPT3YDR394W GAL2P13181 574 aa6.85□□□□□ -1.31
RPT3YDR394W HAP4P14064 554 aa6.85□□□□□ -1.31
RPT3YDR394W ATE1P16639 503 aa6.85□□□□□ -1.31
RPT3YDR394W DIT1P21623 536 aa6.85□□□□□ -1.31
RPT3YDR394W PDC6P26263 563 aaKnown RBP6.85□□□□□ -1.31
RPT3YDR394W KRE2P27809 442 aa6.85□□□□□ -1.31
RPT3YDR394W BMH2P34730 273 aaKnown RBP6.85□□□□□ -1.31
RPT3YDR394W YKT6P36015 200 aaKnown RBP6.85□□□□□ -1.31
RPT3YDR394W TGL4P36165 910 aa6.85□□□□□ -1.31
RPT3YDR394W BOI1P38041 980 aaKnown RBP6.85□□□□□ -1.31
RPT3YDR394W SPL2P38839 148 aa6.85□□□□□ -1.31
RPT3YDR394W YIR042CP40586 236 aa6.85□□□□□ -1.31
RPT3YDR394W ALD2P47771 506 aa6.85□□□□□ -1.31
RPT3YDR394W CTH1P47976 325 aa6.85□□□□□ -1.31
RPT3YDR394W YNL165WP53891 406 aa6.85□□□□□ -1.31
RPT3YDR394W UFD2P54860 961 aa6.85□□□□□ -1.31
RPT3YDR394W RPS15Q01855 142 aaKnown RBP6.85□□□□□ -1.31
RPT3YDR394W ESC2Q06340 456 aa6.85□□□□□ -1.31
RPT3YDR394W IRC3Q06683 689 aa6.85□□□□□ -1.31
RPT3YDR394W GPA1P08539 472 aa6.84□□□□□ -1.31
RPT3YDR394W FRD1P32614 470 aaKnown RBP6.84□□□□□ -1.31
RPT3YDR394W CAB3P36076 571 aa6.84□□□□□ -1.31
RPT3YDR394W RRM3P38766 723 aa6.84□□□□□ -1.31
RPT3YDR394W RTS1P38903 757 aa6.84□□□□□ -1.31
RPT3YDR394W CEM1P39525 442 aa6.84□□□□□ -1.31
RPT3YDR394W TCB2P48231 1178 aa6.84□□□□□ -1.31
RPT3YDR394W YMR265CQ03508 461 aaKnown RBP6.84□□□□□ -1.31
RPT3YDR394W SGD1Q06132 899 aa6.84□□□□□ -1.31
RPT3YDR394W RIX7Q07844 837 aaKnown RBP6.84□□□□□ -1.31
RPT3YDR394W TRS33Q99394 268 aa6.84□□□□□ -1.31
RPT3YDR394W HSP82P02829 709 aaKnown RBP6.83□□□□□ -1.32
RPT3YDR394W LCB1P25045 558 aaKnown RBP6.83□□□□□ -1.32
RPT3YDR394W PTK1P36002 662 aaPredicted RBP6.83□□□□□ -1.32
RPT3YDR394W PFF1P38244 976 aa6.83□□□□□ -1.32
RPT3YDR394W YER130CP39959 443 aa6.83□□□□□ -1.32
RPT3YDR394W TFG2P41896 400 aaPredicted RBP6.83□□□□□ -1.32
RPT3YDR394W EPL1P43572 832 aa6.83□□□□□ -1.32
RPT3YDR394W YFH7P43591 353 aa6.83□□□□□ -1.32
RPT3YDR394W ALG2P43636 503 aa6.83□□□□□ -1.32
RPT3YDR394W ROM1P53046 1155 aa6.83□□□□□ -1.32
RPT3YDR394W RPT4P53549 437 aaKnown RBP6.83□□□□□ -1.32
RPT3YDR394W IRC4Q03036 179 aa6.83□□□□□ -1.32
RPT3YDR394W HXK1P04806 485 aaKnown RBP6.82□□□□□ -1.32
RPT3YDR394W CYC8P14922 966 aa6.82□□□□□ -1.32
RPT3YDR394W SWI4P25302 1093 aaKnown RBP6.82□□□□□ -1.32
RPT3YDR394W MYO3P36006 1272 aa6.82□□□□□ -1.32
RPT3YDR394W MAL31P38156 614 aa6.82□□□□□ -1.32
RPT3YDR394W RPN10P38886 268 aaKnown RBP6.82□□□□□ -1.32
RPT3YDR394W AKR1P39010 764 aa6.82□□□□□ -1.32
RPT3YDR394W STU2P46675 888 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms