RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C CDC9P04819 755 aa5.05□□□□□ -1.6
CDC9YDL164C RPS31P05759 152 aaKnown RBP5.05□□□□□ -1.6
CDC9YDL164C NAT1P12945 854 aaKnown RBP5.05□□□□□ -1.6
CDC9YDL164C IMP2'P32351 346 aa5.05□□□□□ -1.6
CDC9YDL164C NPL4P33755 580 aa5.05□□□□□ -1.6
CDC9YDL164C PAN5P38787 379 aa5.05□□□□□ -1.6
CDC9YDL164C TMA46Q12000 345 aaKnown RBP5.05□□□□□ -1.6
CDC9YDL164C MED1Q12321 566 aa5.05□□□□□ -1.6
CDC9YDL164C NIC96P34077 839 aa5.04□□□□□ -1.6
CDC9YDL164C QDR2P40474 542 aa5.04□□□□□ -1.6
CDC9YDL164C MTR4P47047 1073 aaKnown RBP5.04□□□□□ -1.6
CDC9YDL164C YJR096WP47137 282 aa5.04□□□□□ -1.6
CDC9YDL164C UPF3P48412 387 aaKnown RBP5.04□□□□□ -1.6
CDC9YDL164C PBP1P53297 722 aaKnown RBP5.04□□□□□ -1.6
CDC9YDL164C MEP3P53390 489 aa5.04□□□□□ -1.6
CDC9YDL164C MOT3P54785 490 aaKnown RBP5.04□□□□□ -1.6
CDC9YDL164C SNP1Q00916 300 aaPredicted RBP5.04□□□□□ -1.6
CDC9YDL164C TRE2Q08693 809 aa5.04□□□□□ -1.6
CDC9YDL164C SRD1P09007 221 aa5.04□□□□□ -1.6
CDC9YDL164C MCM1P11746 286 aa5.04□□□□□ -1.6
CDC9YDL164C UTR2P32623 467 aa5.04□□□□□ -1.6
CDC9YDL164C HIS6P40545 261 aa5.04□□□□□ -1.6
CDC9YDL164C BUL2Q03758 920 aaKnown RBP5.04□□□□□ -1.6
CDC9YDL164C INH1P01097 85 aa5.03□□□□□ -1.6
CDC9YDL164C TPM1P17536 199 aaKnown RBP5.03□□□□□ -1.6
CDC9YDL164C LYP1P32487 611 aa5.03□□□□□ -1.6
CDC9YDL164C STO1P34160 861 aaKnown RBP5.03□□□□□ -1.6
CDC9YDL164C SCD5P34758 872 aa5.03□□□□□ -1.6
CDC9YDL164C VPS8P39702 1274 aa5.03□□□□□ -1.6
CDC9YDL164C OAF1P39720 1047 aaPredicted RBP5.03□□□□□ -1.6
CDC9YDL164C RRN7P40992 514 aa5.03□□□□□ -1.6
CDC9YDL164C Q0182Q9ZZW1 134 aa5.03□□□□□ -1.6
CDC9YDL164C RPC31P17890 251 aa5.03□□□□□ -1.6
CDC9YDL164C FBP26P32604 452 aa5.03□□□□□ -1.6
CDC9YDL164C MRS6P32864 603 aaKnown RBP5.03□□□□□ -1.6
CDC9YDL164C YBR284WP38150 797 aa5.03□□□□□ -1.6
CDC9YDL164C SIP5P40210 489 aaKnown RBP5.03□□□□□ -1.6
CDC9YDL164C NOG1Q02892 647 aaKnown RBP5.03□□□□□ -1.6
CDC9YDL164C TIF35Q04067 274 aaKnown RBP5.03□□□□□ -1.6
CDC9YDL164C IMH1Q06704 911 aaKnown RBP5.03□□□□□ -1.6
CDC9YDL164C NBA1Q08229 501 aaKnown RBP5.03□□□□□ -1.6
CDC9YDL164C TY1B-AO13527 1196 aaKnown RBP5.02□□□□□ -1.61
CDC9YDL164C PRP5P21372 849 aaPredicted RBP5.02□□□□□ -1.61
CDC9YDL164C MLF3P32047 452 aa5.02□□□□□ -1.61
CDC9YDL164C BEM3P32873 1128 aa5.02□□□□□ -1.61
CDC9YDL164C AFR1P33304 620 aa5.02□□□□□ -1.61
CDC9YDL164C ABZ1P37254 787 aaPredicted RBP5.02□□□□□ -1.61
CDC9YDL164C ACA1P39970 489 aa5.02□□□□□ -1.61
CDC9YDL164C YAP1802P53309 568 aa5.02□□□□□ -1.61
CDC9YDL164C SIW14P53965 281 aa5.02□□□□□ -1.61
CDC9YDL164C ROD1Q02805 837 aa5.02□□□□□ -1.61
CDC9YDL164C MLC2Q06580 163 aa5.02□□□□□ -1.61
CDC9YDL164C BRE4Q07660 1125 aa5.02□□□□□ -1.61
CDC9YDL164C HEM12P32347 362 aaPredicted RBP5.02□□□□□ -1.61
CDC9YDL164C SER1P33330 395 aaKnown RBP5.02□□□□□ -1.61
CDC9YDL164C LDH1P38139 375 aa5.02□□□□□ -1.61
CDC9YDL164C ERT1P38140 529 aa5.02□□□□□ -1.61
CDC9YDL164C RIM11P38615 370 aa5.02□□□□□ -1.61
CDC9YDL164C APE4P38821 490 aa5.02□□□□□ -1.61
CDC9YDL164C PEX28P38848 579 aa5.02□□□□□ -1.61
CDC9YDL164C DSS1P39112 969 aa5.02□□□□□ -1.61
CDC9YDL164C UTP7P40055 554 aaKnown RBP5.02□□□□□ -1.61
CDC9YDL164C QRI7P43122 407 aa5.02□□□□□ -1.61
CDC9YDL164C VPS30Q02948 557 aa5.02□□□□□ -1.61
CDC9YDL164C HFD1Q04458 532 aa5.02□□□□□ -1.61
CDC9YDL164C STE6P12866 1290 aa5.01□□□□□ -1.61
CDC9YDL164C PYC2P32327 1180 aaKnown RBP5.01□□□□□ -1.61
CDC9YDL164C SAP185P40856 1058 aa5.01□□□□□ -1.61
CDC9YDL164C UBP6P43593 499 aaKnown RBP5.01□□□□□ -1.61
CDC9YDL164C KXD1P53158 218 aa5.01□□□□□ -1.61
CDC9YDL164C YGR250CP53316 781 aaKnown RBP5.01□□□□□ -1.61
CDC9YDL164C CEG1Q01159 459 aaPredicted RBP5.01□□□□□ -1.61
CDC9YDL164C EIS1Q05050 843 aaKnown RBP5.01□□□□□ -1.61
CDC9YDL164C MSD1P15179 658 aaKnown RBP5□□□□□ -1.61
CDC9YDL164C SPO16P17122 198 aa5□□□□□ -1.61
CDC9YDL164C SFL1P20134 766 aa5□□□□□ -1.61
CDC9YDL164C SHM1P37292 490 aaPredicted RBP5□□□□□ -1.61
CDC9YDL164C NOP4P37838 685 aaKnown RBP5□□□□□ -1.61
CDC9YDL164C MEP1P40260 492 aa5□□□□□ -1.61
CDC9YDL164C DUG1P43616 481 aaKnown RBP5□□□□□ -1.61
CDC9YDL164C UTP4Q06679 776 aaKnown RBP5□□□□□ -1.61
CDC9YDL164C WTM2Q12206 467 aa5□□□□□ -1.61
CDC9YDL164C INO1P11986 533 aa5□□□□□ -1.61
CDC9YDL164C RAD53P22216 821 aa5□□□□□ -1.61
CDC9YDL164C MIH1P23748 554 aa5□□□□□ -1.61
CDC9YDL164C RRN3P36070 627 aa5□□□□□ -1.61
CDC9YDL164C RVS167P39743 482 aaKnown RBP5□□□□□ -1.61
CDC9YDL164C SRB7P47822 140 aa5□□□□□ -1.61
CDC9YDL164C YGR016WP53209 190 aa5□□□□□ -1.61
CDC9YDL164C YDR338CQ05497 695 aa5□□□□□ -1.61
CDC9YDL164C RGA2Q06407 1009 aa5□□□□□ -1.61
CDC9YDL164C KAR2P16474 682 aaKnown RBP4.99□□□□□ -1.61
CDC9YDL164C MSH3P25336 1018 aa4.99□□□□□ -1.61
CDC9YDL164C GFD2P25370 566 aaKnown RBP4.99□□□□□ -1.61
CDC9YDL164C NUP120P35729 1037 aa4.99□□□□□ -1.61
CDC9YDL164C PCM1P38628 557 aaKnown RBP4.99□□□□□ -1.61
CDC9YDL164C SUM1P46676 1062 aa4.99□□□□□ -1.61
CDC9YDL164C TAF1P46677 1066 aa4.99□□□□□ -1.61
CDC9YDL164C CTF4Q01454 927 aa4.99□□□□□ -1.61
CDC9YDL164C CLF1Q12309 687 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms