RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C CIT3P43635 486 aa7.59□□□□□ -1.19
TDP1YBR223C SMC3P47037 1230 aa7.59□□□□□ -1.19
TDP1YBR223C ASE1P50275 885 aa7.59□□□□□ -1.19
TDP1YBR223C BOP3P53958 396 aa7.59□□□□□ -1.19
TDP1YBR223C ADY4Q05955 493 aa7.59□□□□□ -1.19
TDP1YBR223C GAS5Q08193 484 aa7.59□□□□□ -1.19
TDP1YBR223C YPL216WQ08964 1102 aa7.59□□□□□ -1.19
TDP1YBR223C NEW1Q08972 1196 aaKnown RBP7.59□□□□□ -1.19
TDP1YBR223C CWC2Q12046 339 aaPredicted RBP7.59□□□□□ -1.19
TDP1YBR223C OSH2Q12451 1283 aa7.59□□□□□ -1.19
TDP1YBR223C MIP1P15801 1254 aa7.58□□□□□ -1.2
TDP1YBR223C CHS3P29465 1165 aa7.58□□□□□ -1.2
TDP1YBR223C YKU70P32807 602 aa7.58□□□□□ -1.2
TDP1YBR223C VPS45P38932 577 aa7.58□□□□□ -1.2
TDP1YBR223C EFM4P40516 257 aa7.58□□□□□ -1.2
TDP1YBR223C YLH47Q06493 454 aa7.58□□□□□ -1.2
TDP1YBR223C VIP1Q06685 1146 aaKnown RBP7.58□□□□□ -1.2
TDP1YBR223C RPL8AP17076 256 aaKnown RBP7.57□□□□□ -1.2
TDP1YBR223C CKA2P19454 339 aa7.57□□□□□ -1.2
TDP1YBR223C GSY1P23337 708 aa7.57□□□□□ -1.2
TDP1YBR223C PDC6P26263 563 aaKnown RBP7.57□□□□□ -1.2
TDP1YBR223C SEC20P28791 383 aa7.57□□□□□ -1.2
TDP1YBR223C BYE1P36106 594 aa7.57□□□□□ -1.2
TDP1YBR223C YBL086CP38177 466 aa7.57□□□□□ -1.2
TDP1YBR223C GTT3P39996 337 aa7.57□□□□□ -1.2
TDP1YBR223C MVP1P40959 511 aaKnown RBP7.57□□□□□ -1.2
TDP1YBR223C MSN5P52918 1224 aa7.57□□□□□ -1.2
TDP1YBR223C CBK1P53894 756 aa7.57□□□□□ -1.2
TDP1YBR223C OPY2Q06810 360 aa7.57□□□□□ -1.2
TDP1YBR223C PLP2Q12017 286 aa7.57□□□□□ -1.2
TDP1YBR223C MYO1P08964 1928 aa7.57□□□□□ -1.2
TDP1YBR223C RAD57P25301 460 aa7.56□□□□□ -1.2
TDP1YBR223C RPC53P25441 422 aa7.56□□□□□ -1.2
TDP1YBR223C DEP1P31385 405 aa7.56□□□□□ -1.2
TDP1YBR223C UGA2P38067 497 aa7.56□□□□□ -1.2
TDP1YBR223C ORC6P38826 435 aa7.56□□□□□ -1.2
TDP1YBR223C SMF1P38925 575 aa7.56□□□□□ -1.2
TDP1YBR223C SMC2P38989 1170 aaKnown RBP7.56□□□□□ -1.2
TDP1YBR223C IES1P43579 692 aa7.56□□□□□ -1.2
TDP1YBR223C SKG3Q06315 1026 aa7.56□□□□□ -1.2
TDP1YBR223C PCL8Q08966 492 aa7.56□□□□□ -1.2
TDP1YBR223C RRG1Q12167 365 aaPredicted RBP7.56□□□□□ -1.2
TDP1YBR223C SMC6Q12749 1114 aa7.56□□□□□ -1.2
TDP1YBR223C TOM70P07213 617 aaKnown RBP7.56□□□□□ -1.2
TDP1YBR223C PPR1P07272 904 aaPredicted RBP7.56□□□□□ -1.2
TDP1YBR223C ISY1P21374 235 aaPredicted RBP7.56□□□□□ -1.2
TDP1YBR223C CLB1P24868 471 aa7.56□□□□□ -1.2
TDP1YBR223C YKL222CP35995 705 aa7.56□□□□□ -1.2
TDP1YBR223C LSB1P53281 241 aa7.56□□□□□ -1.2
TDP1YBR223C MRS2Q01926 470 aa7.56□□□□□ -1.2
TDP1YBR223C YLR001CQ07895 862 aa7.56□□□□□ -1.2
TDP1YBR223C TOP1P04786 769 aa7.55□□□□□ -1.2
TDP1YBR223C CKI1P20485 582 aa7.55□□□□□ -1.2
TDP1YBR223C PWP2P25635 923 aaKnown RBP7.55□□□□□ -1.2
TDP1YBR223C CNS1P33313 385 aa7.55□□□□□ -1.2
TDP1YBR223C VPS41P38959 992 aa7.55□□□□□ -1.2
TDP1YBR223C TOS3P43637 560 aa7.55□□□□□ -1.2
TDP1YBR223C AIM33Q04516 312 aa7.55□□□□□ -1.2
TDP1YBR223C SOV1Q04748 898 aa7.55□□□□□ -1.2
TDP1YBR223C YDL124WQ07551 312 aaKnown RBP7.55□□□□□ -1.2
TDP1YBR223C SRO9P25567 434 aaKnown RBP7.54□□□□□ -1.2
TDP1YBR223C RAM2P29703 316 aa7.54□□□□□ -1.2
TDP1YBR223C ERT1P38140 529 aa7.54□□□□□ -1.2
TDP1YBR223C PPS1P38148 807 aa7.54□□□□□ -1.2
TDP1YBR223C UBP9P39967 754 aa7.54□□□□□ -1.2
TDP1YBR223C EMP47P43555 445 aa7.54□□□□□ -1.2
TDP1YBR223C YGR273CP53329 174 aa7.54□□□□□ -1.2
TDP1YBR223C NGL3Q03210 505 aa7.54□□□□□ -1.2
TDP1YBR223C GYL1Q04322 720 aa7.54□□□□□ -1.2
TDP1YBR223C YEL076C-AP0CX16 216 aa7.53□□□□□ -1.2
TDP1YBR223C YLR464WP0CX17 216 aa7.53□□□□□ -1.2
TDP1YBR223C MAK16P10962 306 aaPredicted RBP7.53□□□□□ -1.2
TDP1YBR223C SSB1P11484 613 aaKnown RBP7.53□□□□□ -1.2
TDP1YBR223C SAM2P19358 384 aaKnown RBP7.53□□□□□ -1.2
TDP1YBR223C MSH1P25846 959 aa7.53□□□□□ -1.2
TDP1YBR223C ICL1P28240 557 aaPredicted RBP7.53□□□□□ -1.2
TDP1YBR223C NFU1P32860 256 aa7.53□□□□□ -1.2
TDP1YBR223C XRS2P33301 854 aa7.53□□□□□ -1.2
TDP1YBR223C SAP1P39955 897 aaKnown RBP7.53□□□□□ -1.2
TDP1YBR223C YEL076CP39971 216 aa7.53□□□□□ -1.2
TDP1YBR223C SSB2P40150 613 aaKnown RBP7.53□□□□□ -1.2
TDP1YBR223C RNT1Q02555 471 aa7.53□□□□□ -1.2
TDP1YBR223C BUL2Q03758 920 aaKnown RBP7.53□□□□□ -1.2
TDP1YBR223C OMS1Q06668 471 aa7.53□□□□□ -1.2
TDP1YBR223C RUD3Q12234 484 aaKnown RBP7.53□□□□□ -1.2
TDP1YBR223C TUS1Q06412 1307 aa7.53□□□□□ -1.2
TDP1YBR223C CDC60P26637 1090 aaKnown RBP7.52□□□□□ -1.2
TDP1YBR223C APL1P27351 700 aa7.52□□□□□ -1.2
TDP1YBR223C CLB5P30283 435 aa7.52□□□□□ -1.2
TDP1YBR223C AFG2P32794 780 aa7.52□□□□□ -1.2
TDP1YBR223C NIP100P33420 868 aa7.52□□□□□ -1.2
TDP1YBR223C CST26P38226 397 aa7.52□□□□□ -1.2
TDP1YBR223C GAA1P39012 614 aa7.52□□□□□ -1.2
TDP1YBR223C YMR124WP39523 943 aaKnown RBP7.52□□□□□ -1.2
TDP1YBR223C HUL4P40985 892 aa7.52□□□□□ -1.2
TDP1YBR223C CCM1P48237 864 aaPredicted RBP7.52□□□□□ -1.2
TDP1YBR223C MFM1Q02783 413 aa7.52□□□□□ -1.2
TDP1YBR223C SEN54Q02825 467 aaPredicted RBP7.52□□□□□ -1.2
TDP1YBR223C DPL1Q05567 589 aa7.52□□□□□ -1.2
TDP1YBR223C FLO11P08640 1367 aa7.52□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms