RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	ERS1	P17261	260 aa		5.76	□□□□□ -1.49
SHE1	YBL031W	AGP1	P25376	633 aa		5.76	□□□□□ -1.49
SHE1	YBL031W	RER2	P35196	286 aa		5.76	□□□□□ -1.49
SHE1	YBL031W	ADD66	P36040	267 aa		5.76	□□□□□ -1.49
SHE1	YBL031W	TAT2	P38967	592 aa		5.76	□□□□□ -1.49
SHE1	YBL031W	KIP3	P53086	805 aa	Known RBP	5.76	□□□□□ -1.49
SHE1	YBL031W	FAR11	P53917	953 aa		5.76	□□□□□ -1.49
SHE1	YBL031W	DOS2	P54858	310 aa		5.76	□□□□□ -1.49
SHE1	YBL031W	UTP5	Q04177	643 aa	Known RBP	5.76	□□□□□ -1.49
SHE1	YBL031W	STU1	P38198	1513 aa		5.75	□□□□□ -1.49
SHE1	YBL031W	GCD1	P09032	578 aa	Predicted RBP	5.75	□□□□□ -1.49
SHE1	YBL031W	BAS1	P22035	811 aa		5.75	□□□□□ -1.49
SHE1	YBL031W	SBA1	P28707	216 aa	Known RBP	5.75	□□□□□ -1.49
SHE1	YBL031W	MKK2	P32491	506 aa		5.75	□□□□□ -1.49
SHE1	YBL031W	ROD1	Q02805	837 aa		5.75	□□□□□ -1.49
SHE1	YBL031W	SHE9	Q04172	456 aa		5.75	□□□□□ -1.49
SHE1	YBL031W	IKI3	Q06706	1349 aa	Known RBP	5.74	□□□□□ -1.49
SHE1	YBL031W	RAD4	P14736	754 aa		5.74	□□□□□ -1.49
SHE1	YBL031W	MRP8	P35719	219 aa		5.74	□□□□□ -1.49
SHE1	YBL031W	YKL069W	P36088	180 aa		5.74	□□□□□ -1.49
SHE1	YBL031W	SMC4	Q12267	1418 aa		5.74	□□□□□ -1.49
SHE1	YBL031W	DED1	P06634	604 aa	Known RBP	5.73	□□□□□ -1.49
SHE1	YBL031W	SYP1	P25623	870 aa	Known RBP	5.73	□□□□□ -1.49
SHE1	YBL031W	REI1	P38344	393 aa	Predicted RBP	5.73	□□□□□ -1.49
SHE1	YBL031W	SLS1	P42900	643 aa		5.73	□□□□□ -1.49
SHE1	YBL031W	CNN1	P43618	361 aa		5.73	□□□□□ -1.49
SHE1	YBL031W	RKM4	Q12504	494 aa		5.73	□□□□□ -1.49
SHE1	YBL031W	MYO4	P32492	1471 aa		5.72	□□□□□ -1.49
SHE1	YBL031W	DBP5	P20449	482 aa	Known RBP	5.72	□□□□□ -1.49
SHE1	YBL031W	YKL222C	P35995	705 aa		5.72	□□□□□ -1.49
SHE1	YBL031W	RRP14	P36080	434 aa	Known RBP	5.72	□□□□□ -1.49
SHE1	YBL031W	BRN1	P38170	754 aa		5.72	□□□□□ -1.49
SHE1	YBL031W	HSE1	P38753	452 aa		5.72	□□□□□ -1.49
SHE1	YBL031W	TIM54	P47045	478 aa		5.72	□□□□□ -1.49
SHE1	YBL031W	HNT2	P49775	206 aa		5.72	□□□□□ -1.49
SHE1	YBL031W	YMR074C	Q04773	145 aa		5.72	□□□□□ -1.49
SHE1	YBL031W	SPO75	Q07798	868 aa		5.72	□□□□□ -1.49
SHE1	YBL031W	LAP2	Q10740	671 aa		5.72	□□□□□ -1.49
SHE1	YBL031W	ESP1	Q03018	1630 aa		5.72	□□□□□ -1.49
SHE1	YBL031W	DNA2	P38859	1522 aa		5.72	□□□□□ -1.49
SHE1	YBL031W	SCT1	P32784	759 aa		5.71	□□□□□ -1.5
SHE1	YBL031W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
SHE1	YBL031W	IRR1	P40541	1150 aa		5.71	□□□□□ -1.5
SHE1	YBL031W	ECL1	P48235	211 aa		5.71	□□□□□ -1.5
SHE1	YBL031W	HUL5	P53119	910 aa		5.71	□□□□□ -1.5
SHE1	YBL031W	TIF35	Q04067	274 aa	Known RBP	5.71	□□□□□ -1.5
SHE1	YBL031W	NSI1	Q12457	570 aa		5.71	□□□□□ -1.5
SHE1	YBL031W	DFG16	Q99234	619 aa		5.71	□□□□□ -1.5
SHE1	YBL031W	CIT2	P08679	460 aa		5.7	□□□□□ -1.5
SHE1	YBL031W	INO1	P11986	533 aa		5.7	□□□□□ -1.5
SHE1	YBL031W	GAS1	P22146	559 aa	Known RBP	5.7	□□□□□ -1.5
SHE1	YBL031W	ABD1	P32783	436 aa	Predicted RBP	5.7	□□□□□ -1.5
SHE1	YBL031W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
SHE1	YBL031W	YKL107W	P34251	309 aa		5.7	□□□□□ -1.5
SHE1	YBL031W	RGD1	P38339	666 aa		5.7	□□□□□ -1.5
SHE1	YBL031W	YAR028W	P39548	234 aa		5.7	□□□□□ -1.5
SHE1	YBL031W	BUD6	P41697	788 aa		5.7	□□□□□ -1.5
SHE1	YBL031W	VPS53	P47061	822 aa		5.7	□□□□□ -1.5
SHE1	YBL031W	RNH70	P53331	553 aa		5.7	□□□□□ -1.5
SHE1	YBL031W	RAT1	Q02792	1006 aa	Known RBP	5.7	□□□□□ -1.5
SHE1	YBL031W	OSH2	Q12451	1283 aa		5.7	□□□□□ -1.5
SHE1	YBL031W	TOP2	P06786	1428 aa	Known RBP	5.7	□□□□□ -1.5
SHE1	YBL031W	AFG2	P32794	780 aa		5.69	□□□□□ -1.5
SHE1	YBL031W	PPG1	P32838	368 aa		5.69	□□□□□ -1.5
SHE1	YBL031W	WHI3	P34761	661 aa	Known RBP	5.69	□□□□□ -1.5
SHE1	YBL031W	SPC42	P36094	363 aa		5.69	□□□□□ -1.5
SHE1	YBL031W	PBY1	P38254	753 aa		5.69	□□□□□ -1.5
SHE1	YBL031W	MMM1	P41800	426 aa		5.69	□□□□□ -1.5
SHE1	YBL031W	AVO1	Q08236	1176 aa		5.69	□□□□□ -1.5
SHE1	YBL031W	YOR223W	Q12015	292 aa		5.69	□□□□□ -1.5
SHE1	YBL031W	YOR1	P53049	1477 aa		5.69	□□□□□ -1.5
SHE1	YBL031W	STH1	P32597	1359 aa		5.68	□□□□□ -1.5
SHE1	YBL031W	PRP9	P19736	530 aa	Known RBP	5.68	□□□□□ -1.5
SHE1	YBL031W	VBA5	P36172	582 aa		5.68	□□□□□ -1.5
SHE1	YBL031W	ALG3	P38179	458 aa		5.68	□□□□□ -1.5
SHE1	YBL031W	YHR020W	P38708	688 aa	Known RBP	5.68	□□□□□ -1.5
SHE1	YBL031W	CHZ1	P40019	153 aa	Predicted RBP	5.68	□□□□□ -1.5
SHE1	YBL031W	PRP43	P53131	767 aa	Known RBP	5.68	□□□□□ -1.5
SHE1	YBL031W	ERP6	P53198	216 aa		5.68	□□□□□ -1.5
SHE1	YBL031W	YLR225C	Q05948	407 aa	Known RBP	5.68	□□□□□ -1.5
SHE1	YBL031W	RPO31	P04051	1460 aa		5.68	□□□□□ -1.5
SHE1	YBL031W	GAL11	P19659	1081 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	MCM7	P38132	845 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	YBR184W	P38299	523 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	GGA2	P38817	585 aa	Known RBP	5.67	□□□□□ -1.5
SHE1	YBL031W	FPR3	P38911	411 aa	Known RBP	5.67	□□□□□ -1.5
SHE1	YBL031W	NIT1	P40447	199 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	MPH1	P40562	993 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	ALG12	P53730	551 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	ESC2	Q06340	456 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	FMP25	Q08023	583 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	PPM2	Q08282	695 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	FLC1	Q08967	793 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	GNT1	Q12096	491 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	PTC5	Q12511	572 aa		5.67	□□□□□ -1.5
SHE1	YBL031W	HSP60	P19882	572 aa	Known RBP	5.66	□□□□□ -1.5
SHE1	YBL031W	STE5	P32917	917 aa		5.66	□□□□□ -1.5
SHE1	YBL031W	MOT2	P34909	587 aa	Known RBP	5.66	□□□□□ -1.5
SHE1	YBL031W	YGR045C	P53229	120 aa		5.66	□□□□□ -1.5
SHE1	YBL031W	YNR063W	P53749	607 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms