RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Sipa1l2Q80TE4 1722 aa13.52□□□□□ -0.24
Ift88-201ENSMUST00000122063 Rims2Q9EQZ7 1530 aa13.52□□□□□ -0.24
Ift88-201ENSMUST00000122063 Col14a1Q80X19 1797 aa13.52□□□□□ -0.24
Ift88-201ENSMUST00000122063 Dzip1Q8BMD2 852 aa13.52□□□□□ -0.24
Ift88-201ENSMUST00000122063 Amotl1Q9D4H4 968 aa13.52□□□□□ -0.24
Ift88-201ENSMUST00000122063 Tet3Q8BG87 1668 aa13.52□□□□□ -0.24
Ift88-201ENSMUST00000122063 Anapc15-psA0A140T8L6 141 aa13.52□□□□□ -0.25
Ift88-201ENSMUST00000122063 Atf5O70191 283 aa13.52□□□□□ -0.25
Ift88-201ENSMUST00000122063 Nucb1Q02819 459 aaKnown RBP13.52□□□□□ -0.25
Ift88-201ENSMUST00000122063 Ano8Q6PB70 1060 aa13.52□□□□□ -0.25
Ift88-201ENSMUST00000122063 Kcnh5Q920E3 988 aa13.52□□□□□ -0.25
Ift88-201ENSMUST00000122063 Cfdp1O88271 295 aaKnown RBP13.51□□□□□ -0.25
Ift88-201ENSMUST00000122063 Ptpdc1Q6NZK8 747 aa13.51□□□□□ -0.25
Ift88-201ENSMUST00000122063 Ccdc155Q80VJ8 648 aa13.51□□□□□ -0.25
Ift88-201ENSMUST00000122063 Trpm3Q5F4S9 1721 aa13.51□□□□□ -0.25
Ift88-201ENSMUST00000122063 Topaz1E5FYH1 1653 aa13.51□□□□□ -0.25
Ift88-201ENSMUST00000122063 Zap70P43404 618 aa13.51□□□□□ -0.25
Ift88-201ENSMUST00000122063 Mphosph10Q810V0 681 aaKnown RBP13.51□□□□□ -0.25
Ift88-201ENSMUST00000122063 PrkcshO08795 521 aa13.5□□□□□ -0.25
Ift88-201ENSMUST00000122063 Amer1Q7TS75 1132 aa13.5□□□□□ -0.25
Ift88-201ENSMUST00000122063 Cyp2d11P24457 504 aa13.5□□□□□ -0.25
Ift88-201ENSMUST00000122063 Slain2Q8CI08 581 aa13.5□□□□□ -0.25
Ift88-201ENSMUST00000122063 Kdm6aO70546 1401 aa13.5□□□□□ -0.25
Ift88-201ENSMUST00000122063 Mmp8O70138 465 aa13.5□□□□□ -0.25
Ift88-201ENSMUST00000122063 Pdlim2Q8R1G6 349 aa13.5□□□□□ -0.25
Ift88-201ENSMUST00000122063 Zkscan2G3X952 960 aa13.49□□□□□ -0.25
Ift88-201ENSMUST00000122063 1700010I14RikQ7TPG0 532 aa13.49□□□□□ -0.25
Ift88-201ENSMUST00000122063 Eif4a1P60843 406 aaKnown RBP13.49□□□□□ -0.25
Ift88-201ENSMUST00000122063 Nkx2-3P97334 362 aa13.49□□□□□ -0.25
Ift88-201ENSMUST00000122063 Gtf3c3Q3TMP1 882 aa13.48□□□□□ -0.25
Ift88-201ENSMUST00000122063 Erc2Q6PH08 957 aa13.48□□□□□ -0.25
Ift88-201ENSMUST00000122063 RestQ8VIG1 1082 aa13.48□□□□□ -0.25
Ift88-201ENSMUST00000122063 Tlr7P58681 1050 aa13.48□□□□□ -0.25
Ift88-201ENSMUST00000122063 Ncoa4Q5U4H9 625 aa13.48□□□□□ -0.25
Ift88-201ENSMUST00000122063 Rad17Q6NXW6 688 aa13.48□□□□□ -0.25
Ift88-201ENSMUST00000122063 Casq1O09165 405 aa13.48□□□□□ -0.25
Ift88-201ENSMUST00000122063 Atp8b2P98199 1209 aa13.48□□□□□ -0.25
Ift88-201ENSMUST00000122063 Gm21698A0A087WQP8 267 aa13.47□□□□□ -0.25
Ift88-201ENSMUST00000122063 Gm21671G3UY31 267 aa13.47□□□□□ -0.25
Ift88-201ENSMUST00000122063 Farp2Q91VS8 1065 aa13.47□□□□□ -0.25
Ift88-201ENSMUST00000122063 CoilQ5SU73 570 aa13.47□□□□□ -0.25
Ift88-201ENSMUST00000122063 Dixdc1Q80Y83 711 aa13.47□□□□□ -0.25
Ift88-201ENSMUST00000122063 Tshz3Q8CGV9 1081 aa13.47□□□□□ -0.25
Ift88-201ENSMUST00000122063 Mcm4P49717 862 aa13.46□□□□□ -0.25
Ift88-201ENSMUST00000122063 Stk3Q9JI10 497 aa13.46□□□□□ -0.25
Ift88-201ENSMUST00000122063 Myo5bP21271 1818 aa13.46□□□□□ -0.25
Ift88-201ENSMUST00000122063 Nfat5Q9WV30 1534 aa13.46□□□□□ -0.25
Ift88-201ENSMUST00000122063 Bcl9Q9D219 1425 aa13.46□□□□□ -0.25
Ift88-201ENSMUST00000122063 Phactr2B1AVP0 632 aa13.46□□□□□ -0.25
Ift88-201ENSMUST00000122063 Pnpla7A2AJ88 1352 aa13.46□□□□□ -0.26
Ift88-201ENSMUST00000122063 Zranb3Q6NZP1 1069 aa13.45□□□□□ -0.26
Ift88-201ENSMUST00000122063 Ppp1r37Q8BKR5 712 aa13.45□□□□□ -0.26
Ift88-201ENSMUST00000122063 EngaseQ8BX80 734 aa13.45□□□□□ -0.26
Ift88-201ENSMUST00000122063 Dnttip2Q8R2M2 758 aaKnown RBP13.45□□□□□ -0.26
Ift88-201ENSMUST00000122063 Fam50bQ9WTJ8 334 aa13.45□□□□□ -0.26
Ift88-201ENSMUST00000122063 Stk36Q69ZM6 1316 aa13.45□□□□□ -0.26
Ift88-201ENSMUST00000122063 Ier5O89113 308 aa13.45□□□□□ -0.26
Ift88-201ENSMUST00000122063 Map3k2Q61083 619 aa13.45□□□□□ -0.26
Ift88-201ENSMUST00000122063 Tpx2A2APB8 745 aaKnown RBP13.44□□□□□ -0.26
Ift88-201ENSMUST00000122063 Pip4k2bQ80XI4 416 aa13.44□□□□□ -0.26
Ift88-201ENSMUST00000122063 ScaperF8VQ70 1398 aaKnown RBP13.44□□□□□ -0.26
Ift88-201ENSMUST00000122063 Mcmdc2E9Q956 681 aa13.44□□□□□ -0.26
Ift88-201ENSMUST00000122063 Atf3Q60765 181 aa13.44□□□□□ -0.26
Ift88-201ENSMUST00000122063 Chmp7Q8R1T1 451 aa13.44□□□□□ -0.26
Ift88-201ENSMUST00000122063 Kdm4cQ8VCD7 1054 aa13.44□□□□□ -0.26
Ift88-201ENSMUST00000122063 Cnksr1A2A9K7 700 aa13.43□□□□□ -0.26
Ift88-201ENSMUST00000122063 Echdc1Q9D9V3 322 aa13.43□□□□□ -0.26
Ift88-201ENSMUST00000122063 Col1a2Q01149 1372 aa13.43□□□□□ -0.26
Ift88-201ENSMUST00000122063 Nol11Q8BJW5 723 aaKnown RBP13.43□□□□□ -0.26
Ift88-201ENSMUST00000122063 GckrQ91X44 587 aa13.43□□□□□ -0.26
Ift88-201ENSMUST00000122063 TnrQ8BYI9 1358 aa13.43□□□□□ -0.26
Ift88-201ENSMUST00000122063 Rimbp3Q3V0F0 1606 aa13.43□□□□□ -0.26
Ift88-201ENSMUST00000122063 OptnQ8K3K8 584 aa13.43□□□□□ -0.26
Ift88-201ENSMUST00000122063 Zkscan16A2ALW2 728 aa13.42□□□□□ -0.26
Ift88-201ENSMUST00000122063 Pa2g4P50580 394 aaKnown RBP13.42□□□□□ -0.26
Ift88-201ENSMUST00000122063 Jakmip1Q8BVL9 626 aa13.42□□□□□ -0.26
Ift88-201ENSMUST00000122063 Bloc1s4Q8VED2 215 aa13.42□□□□□ -0.26
Ift88-201ENSMUST00000122063 Lmtk3Q5XJV6 1424 aa13.42□□□□□ -0.26
Ift88-201ENSMUST00000122063 Aox2Q5SGK3 1345 aa13.42□□□□□ -0.26
Ift88-201ENSMUST00000122063 Brpf1B2RRD7 1212 aa13.42□□□□□ -0.26
Ift88-201ENSMUST00000122063 PsapQ61207 557 aaKnown RBP13.42□□□□□ -0.26
Ift88-201ENSMUST00000122063 Bend3Q6PAL0 825 aa13.42□□□□□ -0.26
Ift88-201ENSMUST00000122063 Ddit3P35639 168 aa13.41□□□□□ -0.26
Ift88-201ENSMUST00000122063 TkfcQ8VC30 578 aa13.41□□□□□ -0.26
Ift88-201ENSMUST00000122063 Dlg5E9Q9R9 1921 aa13.41□□□□□ -0.26
Ift88-201ENSMUST00000122063 Nup153E9Q3G8 1462 aaKnown RBP13.41□□□□□ -0.26
Ift88-201ENSMUST00000122063 Elp1Q7TT37 1333 aaKnown RBP13.41□□□□□ -0.26
Ift88-201ENSMUST00000122063 MccE9PWI3 1003 aa13.41□□□□□ -0.26
Ift88-201ENSMUST00000122063 Tceal9Q9DD24 104 aa13.41□□□□□ -0.26
Ift88-201ENSMUST00000122063 Zbtb45Q52KG4 520 aa13.41□□□□□ -0.26
Ift88-201ENSMUST00000122063 Cyp27a1Q9DBG1 533 aa13.41□□□□□ -0.26
Ift88-201ENSMUST00000122063 Thsd7aQ69ZU6 1645 aa13.4□□□□□ -0.26
Ift88-201ENSMUST00000122063 Adcy9P51830 1353 aa13.4□□□□□ -0.26
Ift88-201ENSMUST00000122063 Hspa2P17156 633 aa13.4□□□□□ -0.26
Ift88-201ENSMUST00000122063 Cnnm1Q0GA42 951 aa13.4□□□□□ -0.26
Ift88-201ENSMUST00000122063 Tgfb1i1Q62219 461 aa13.4□□□□□ -0.26
Ift88-201ENSMUST00000122063 Jarid2Q62315 1234 aa13.4□□□□□ -0.26
Ift88-201ENSMUST00000122063 Pdzd9Q9D9M4 266 aa13.4□□□□□ -0.26
Ift88-201ENSMUST00000122063 Gdpd2Q9ESM6 539 aa13.4□□□□□ -0.26
Ift88-201ENSMUST00000122063 Abcc12Q80WJ6 1366 aa13.4□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms