RNA–Protein interactions for RNA: ENSMUST00000093346.5

H2afv-201, Transcript of Histone H2A.V, mousemouse

TSL 1 (best) BASIC

Gene H2afv, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2afv-201ENSMUST00000093346 Col1a2Q01149 1372 aa17.06■□□□□ 0.32
H2afv-201ENSMUST00000093346 Gnai1B2RSH2 354 aa17.06■□□□□ 0.32
H2afv-201ENSMUST00000093346 Ccdc85cE9Q6B2 420 aa17.06■□□□□ 0.32
H2afv-201ENSMUST00000093346 Cers3Q1A3B0 383 aa17.06■□□□□ 0.32
H2afv-201ENSMUST00000093346 Ralbp1Q62172 648 aa17.06■□□□□ 0.32
H2afv-201ENSMUST00000093346 Speer4f1Q9D5Q6 258 aa17.06■□□□□ 0.32
H2afv-201ENSMUST00000093346 Gnai3Q9DC51 354 aa17.06■□□□□ 0.32
H2afv-201ENSMUST00000093346 MeiocA2AG06 965 aa17.05■□□□□ 0.32
H2afv-201ENSMUST00000093346 TefQ9JLC6 301 aa17.05■□□□□ 0.32
H2afv-201ENSMUST00000093346 Gm13023A2A8N2 498 aa17.04■□□□□ 0.32
H2afv-201ENSMUST00000093346 NppbP40753 121 aa17.04■□□□□ 0.32
H2afv-201ENSMUST00000093346 Miga2Q8BK03 593 aa17.04■□□□□ 0.32
H2afv-201ENSMUST00000093346 DiexfQ8BTT6 772 aaKnown RBP17.04■□□□□ 0.32
H2afv-201ENSMUST00000093346 Mylk2Q8VCR8 613 aa17.04■□□□□ 0.32
H2afv-201ENSMUST00000093346 Irx6Q9ER75 438 aa17.04■□□□□ 0.32
H2afv-201ENSMUST00000093346 PigbQ9JJQ0 542 aa17.04■□□□□ 0.32
H2afv-201ENSMUST00000093346 Eif4a1P60843 406 aaKnown RBP17.03■□□□□ 0.32
H2afv-201ENSMUST00000093346 Neurod2Q62414 383 aa17.03■□□□□ 0.32
H2afv-201ENSMUST00000093346 U2surpQ6NV83 1029 aaKnown RBP17.03■□□□□ 0.32
H2afv-201ENSMUST00000093346 Flad1Q8R123 492 aa17.03■□□□□ 0.32
H2afv-201ENSMUST00000093346 Foxp4Q9DBY0 795 aaKnown RBP17.03■□□□□ 0.32
H2afv-201ENSMUST00000093346 Cnnm1Q0GA42 951 aa17.02■□□□□ 0.32
H2afv-201ENSMUST00000093346 Iqsec3Q3TES0 1195 aa17.02■□□□□ 0.32
H2afv-201ENSMUST00000093346 Klhdc4Q921I2 584 aa17.02■□□□□ 0.32
H2afv-201ENSMUST00000093346 Atxn3Q9CVD2 355 aa17.02■□□□□ 0.32
H2afv-201ENSMUST00000093346 Cdc37l1Q9CZP7 335 aa17.02■□□□□ 0.32
H2afv-201ENSMUST00000093346 Jdp2P97875 163 aa17.01■□□□□ 0.31
H2afv-201ENSMUST00000093346 Anks4bQ8K3X6 423 aa17.01■□□□□ 0.31
H2afv-201ENSMUST00000093346 Zfyve9A2A8R0 1397 aa17.01■□□□□ 0.31
H2afv-201ENSMUST00000093346 MetP16056 1379 aa17.01■□□□□ 0.31
H2afv-201ENSMUST00000093346 Pibf1E9Q6K3 756 aa17■□□□□ 0.31
H2afv-201ENSMUST00000093346 Rad21Q61550 635 aaKnown RBP17■□□□□ 0.31
H2afv-201ENSMUST00000093346 Spata31d1bE9QA57 1361 aa17■□□□□ 0.31
H2afv-201ENSMUST00000093346 Ankrd50F7BE84 1390 aa17■□□□□ 0.31
H2afv-201ENSMUST00000093346 C4bP01029 1738 aa16.99■□□□□ 0.31
H2afv-201ENSMUST00000093346 Lrrc43Q3V0L5 667 aa16.99■□□□□ 0.31
H2afv-201ENSMUST00000093346 Usp16Q99LG0 825 aa16.99■□□□□ 0.31
H2afv-201ENSMUST00000093346 Taf7Q9R1C0 341 aa16.99■□□□□ 0.31
H2afv-201ENSMUST00000093346 Syde2E9PUP1 1314 aa16.98■□□□□ 0.31
H2afv-201ENSMUST00000093346 Ttc21aQ8C0S4 1314 aa16.98■□□□□ 0.31
H2afv-201ENSMUST00000093346 1700019A02RikA0A087WPV9 146 aa16.98■□□□□ 0.31
H2afv-201ENSMUST00000093346 Tnnt1O88346 262 aa16.98■□□□□ 0.31
H2afv-201ENSMUST00000093346 GckrQ91X44 587 aa16.98■□□□□ 0.31
H2afv-201ENSMUST00000093346 RtcbQ99LF4 505 aaKnown RBP16.98■□□□□ 0.31
H2afv-201ENSMUST00000093346 Senp3Q9EP97 568 aaKnown RBP16.98■□□□□ 0.31
H2afv-201ENSMUST00000093346 Trpc5Q9QX29 975 aa16.98■□□□□ 0.31
H2afv-201ENSMUST00000093346 AtrnQ9WU60 1428 aa16.97■□□□□ 0.31
H2afv-201ENSMUST00000093346 Rbm25B2RY56 838 aaKnown RBP16.97■□□□□ 0.31
H2afv-201ENSMUST00000093346 Q3TQI7 289 aaKnown RBP16.97■□□□□ 0.31
H2afv-201ENSMUST00000093346 Chpf2Q3UU43 768 aa16.97■□□□□ 0.31
H2afv-201ENSMUST00000093346 Gm12185Q5NCB2 835 aa16.97■□□□□ 0.31
H2afv-201ENSMUST00000093346 Gpr150Q8BL07 427 aa16.97■□□□□ 0.31
H2afv-201ENSMUST00000093346 NudcO35685 332 aaKnown RBP16.96■□□□□ 0.31
H2afv-201ENSMUST00000093346 Cyp2d12Q8BVD2 504 aa16.96■□□□□ 0.31
H2afv-201ENSMUST00000093346 Nip7Q9CXK8 180 aaKnown RBP16.96■□□□□ 0.31
H2afv-201ENSMUST00000093346 IncenpQ9WU62 880 aa16.96■□□□□ 0.31
H2afv-201ENSMUST00000093346 Ccdc30Q8BVF4 654 aa16.95■□□□□ 0.3
H2afv-201ENSMUST00000093346 Tmem119Q8R138 280 aa16.95■□□□□ 0.3
H2afv-201ENSMUST00000093346 Zbtb1Q91VL9 713 aa16.95■□□□□ 0.3
H2afv-201ENSMUST00000093346 Prr29B1ARI9 187 aa16.94■□□□□ 0.3
H2afv-201ENSMUST00000093346 Atf5O70191 283 aa16.94■□□□□ 0.3
H2afv-201ENSMUST00000093346 Fkbp4P30416 458 aa16.94■□□□□ 0.3
H2afv-201ENSMUST00000093346 CastP51125 788 aa16.94■□□□□ 0.3
H2afv-201ENSMUST00000093346 PsdQ5DTT2 1024 aa16.94■□□□□ 0.3
H2afv-201ENSMUST00000093346 PsapQ61207 557 aaKnown RBP16.94■□□□□ 0.3
H2afv-201ENSMUST00000093346 Clcn1Q64347 994 aa16.94■□□□□ 0.3
H2afv-201ENSMUST00000093346 Prkab2Q6PAM0 271 aa16.94■□□□□ 0.3
H2afv-201ENSMUST00000093346 Pdia6Q922R8 440 aaKnown RBP16.94■□□□□ 0.3
H2afv-201ENSMUST00000093346 Ubr3Q5U430 1889 aa16.94■□□□□ 0.3
H2afv-201ENSMUST00000093346 Erbb4Q61527 1308 aa16.94■□□□□ 0.3
H2afv-201ENSMUST00000093346 Bcl2l13P59017 434 aa16.93■□□□□ 0.3
H2afv-201ENSMUST00000093346 ErfeQ6PGN1 340 aa16.93■□□□□ 0.3
H2afv-201ENSMUST00000093346 Rapgef4Q9EQZ6 1011 aa16.93■□□□□ 0.3
H2afv-201ENSMUST00000093346 Dlg5E9Q9R9 1921 aa16.93■□□□□ 0.3
H2afv-201ENSMUST00000093346 Msl1Q6PDM1 616 aa16.92■□□□□ 0.3
H2afv-201ENSMUST00000093346 Sumf1Q8R0F3 372 aa16.92■□□□□ 0.3
H2afv-201ENSMUST00000093346 HmcesQ8R1M0 353 aaKnown RBP16.92■□□□□ 0.3
H2afv-201ENSMUST00000093346 Col11a2Q64739 1736 aa16.91■□□□□ 0.3
H2afv-201ENSMUST00000093346 Sned1Q70E20 1403 aa16.91■□□□□ 0.3
H2afv-201ENSMUST00000093346 En2P09066 324 aa16.91■□□□□ 0.3
H2afv-201ENSMUST00000093346 Zfp444Q3TDV8 331 aaKnown RBP16.91■□□□□ 0.3
H2afv-201ENSMUST00000093346 Ksr2Q3UVC0 959 aa16.91■□□□□ 0.3
H2afv-201ENSMUST00000093346 Morc2aQ69ZX6 1030 aa16.91■□□□□ 0.3
H2afv-201ENSMUST00000093346 Gigyf1Q99MR1 1044 aaKnown RBP16.91■□□□□ 0.3
H2afv-201ENSMUST00000093346 Plekhh1Q80TI1 1356 aa16.9■□□□□ 0.3
H2afv-201ENSMUST00000093346 Chrna2Q91X60 512 aa16.9■□□□□ 0.3
H2afv-201ENSMUST00000093346 Plch1Q4KWH5 1682 aa16.89■□□□□ 0.29
H2afv-201ENSMUST00000093346 Atp1b3P97370 278 aa16.89■□□□□ 0.29
H2afv-201ENSMUST00000093346 SympkQ80X82 1284 aa16.89■□□□□ 0.29
H2afv-201ENSMUST00000093346 Amhr2Q8K592 568 aa16.89■□□□□ 0.29
H2afv-201ENSMUST00000093346 Emilin1Q99K41 1017 aa16.89■□□□□ 0.29
H2afv-201ENSMUST00000093346 Magea1O89006 320 aa16.88■□□□□ 0.29
H2afv-201ENSMUST00000093346 Magea5O89009 320 aa16.88■□□□□ 0.29
H2afv-201ENSMUST00000093346 Ofd1Q80Z25 1017 aa16.88■□□□□ 0.29
H2afv-201ENSMUST00000093346 Slc39a6Q8C145 765 aa16.88■□□□□ 0.29
H2afv-201ENSMUST00000093346 Col23a1Q8K4G2 532 aa16.88■□□□□ 0.29
H2afv-201ENSMUST00000093346 Magea2Q9R2A2 320 aa16.88■□□□□ 0.29
H2afv-201ENSMUST00000093346 Col4a1P02463 1669 aa16.88■□□□□ 0.29
H2afv-201ENSMUST00000093346 Prr5lA2AVJ5 370 aa16.87■□□□□ 0.29
H2afv-201ENSMUST00000093346 Slfnl1Q8BHW9 410 aa16.87■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms