RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Cadps2Q8BYR5 1297 aa13.97□□□□□ -0.17
Trim23-203ENSMUST00000069187 Ttc21aQ8C0S4 1314 aa13.97□□□□□ -0.17
Trim23-203ENSMUST00000069187 Tnnt2P50752 301 aa13.97□□□□□ -0.17
Trim23-203ENSMUST00000069187 Zfp91Q62511 572 aa13.97□□□□□ -0.17
Trim23-203ENSMUST00000069187 Zranb3Q6NZP1 1069 aa13.97□□□□□ -0.17
Trim23-203ENSMUST00000069187 Zkscan1Q8BGS3 561 aaKnown RBP13.97□□□□□ -0.17
Trim23-203ENSMUST00000069187 Col18a1P39061 1774 aa13.97□□□□□ -0.17
Trim23-203ENSMUST00000069187 BccipQ9CWI3 316 aa13.96□□□□□ -0.17
Trim23-203ENSMUST00000069187 Tfip11Q9ERA6 838 aaKnown RBP13.96□□□□□ -0.17
Trim23-203ENSMUST00000069187 TnrQ8BYI9 1358 aa13.96□□□□□ -0.18
Trim23-203ENSMUST00000069187 Uhrf1bp1B2KF50 1429 aa13.95□□□□□ -0.18
Trim23-203ENSMUST00000069187 G3bp1P97855 465 aaKnown RBP13.95□□□□□ -0.18
Trim23-203ENSMUST00000069187 Tbc1d9Q3UYK3 1264 aa13.95□□□□□ -0.18
Trim23-203ENSMUST00000069187 4931400O07RikQ9D4M5 137 aa13.95□□□□□ -0.18
Trim23-203ENSMUST00000069187 Ankrd50F7BE84 1390 aa13.95□□□□□ -0.18
Trim23-203ENSMUST00000069187 Cgnl1Q6AW69 1298 aa13.95□□□□□ -0.18
Trim23-203ENSMUST00000069187 Ggnbp2Q5SV77 696 aa13.94□□□□□ -0.18
Trim23-203ENSMUST00000069187 NcapgE9PWG6 1004 aa13.94□□□□□ -0.18
Trim23-203ENSMUST00000069187 Anapc15-psA0A140T8L6 141 aa13.94□□□□□ -0.18
Trim23-203ENSMUST00000069187 Card10P58660 1021 aa13.93□□□□□ -0.18
Trim23-203ENSMUST00000069187 OptnQ8K3K8 584 aa13.93□□□□□ -0.18
Trim23-203ENSMUST00000069187 Ddx54Q8K4L0 874 aaKnown RBP13.93□□□□□ -0.18
Trim23-203ENSMUST00000069187 Kdm6aO70546 1401 aa13.93□□□□□ -0.18
Trim23-203ENSMUST00000069187 Gzf1Q4VBD9 706 aa13.93□□□□□ -0.18
Trim23-203ENSMUST00000069187 Glipr1l2Q9CQ35 332 aa13.93□□□□□ -0.18
Trim23-203ENSMUST00000069187 Ggt6Q6PDE7 497 aa13.93□□□□□ -0.18
Trim23-203ENSMUST00000069187 Znf330Q922H9 316 aa13.93□□□□□ -0.18
Trim23-203ENSMUST00000069187 Q3TQI7 289 aaKnown RBP13.92□□□□□ -0.18
Trim23-203ENSMUST00000069187 Pnma3Q8JZW8 466 aa13.92□□□□□ -0.18
Trim23-203ENSMUST00000069187 Txnrd1Q9JMH6 613 aa13.92□□□□□ -0.18
Trim23-203ENSMUST00000069187 Camta1A2A891 1682 aa13.92□□□□□ -0.18
Trim23-203ENSMUST00000069187 Parp14Q2EMV9 1817 aa13.92□□□□□ -0.18
Trim23-203ENSMUST00000069187 Rasa1E9PYG6 1038 aa13.92□□□□□ -0.18
Trim23-203ENSMUST00000069187 Rps6ka5Q8C050 863 aa13.92□□□□□ -0.18
Trim23-203ENSMUST00000069187 Chrna2Q91X60 512 aa13.92□□□□□ -0.18
Trim23-203ENSMUST00000069187 Klhdc4Q921I2 584 aa13.91□□□□□ -0.18
Trim23-203ENSMUST00000069187 Ubr1O70481 1757 aa13.91□□□□□ -0.18
Trim23-203ENSMUST00000069187 CrklP47941 303 aa13.91□□□□□ -0.18
Trim23-203ENSMUST00000069187 Zpr1Q62384 459 aa13.91□□□□□ -0.18
Trim23-203ENSMUST00000069187 EngaseQ8BX80 734 aa13.91□□□□□ -0.18
Trim23-203ENSMUST00000069187 DccP70211 1447 aa13.91□□□□□ -0.18
Trim23-203ENSMUST00000069187 Sos1Q62245 1319 aa13.91□□□□□ -0.18
Trim23-203ENSMUST00000069187 Tom1O88746 492 aa13.91□□□□□ -0.18
Trim23-203ENSMUST00000069187 Nek4Q9Z1J2 792 aa13.91□□□□□ -0.18
Trim23-203ENSMUST00000069187 Nid2O88322 1403 aa13.91□□□□□ -0.18
Trim23-203ENSMUST00000069187 Wdr78E9PYY5 807 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 Kdm4aQ8BW72 1064 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 Map2P20357 1828 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 Plekhd1B2RPU2 505 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 Tnnt1O88346 262 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 GorabQ8BRM2 368 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 CenppQ9CZ92 286 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 Amotl1Q9D4H4 968 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 Gm45140A0A0N4SUM8 220 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 Nectin2P32507 530 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 Mindy4Q3UQI9 744 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 MvpQ9EQK5 861 aa13.9□□□□□ -0.18
Trim23-203ENSMUST00000069187 Atp7bQ64446 1462 aa13.89□□□□□ -0.19
Trim23-203ENSMUST00000069187 Snap23O09044 210 aa13.89□□□□□ -0.19
Trim23-203ENSMUST00000069187 Aldh1l1Q8R0Y6 902 aa13.89□□□□□ -0.19
Trim23-203ENSMUST00000069187 Kif3aP28741 701 aa13.89□□□□□ -0.19
Trim23-203ENSMUST00000069187 Chmp7Q8R1T1 451 aa13.89□□□□□ -0.19
Trim23-203ENSMUST00000069187 Mdc1Q5PSV9 1707 aa13.89□□□□□ -0.19
Trim23-203ENSMUST00000069187 Spef2Q8C9J3 1734 aa13.89□□□□□ -0.19
Trim23-203ENSMUST00000069187 Gli3Q61602 1583 aa13.88□□□□□ -0.19
Trim23-203ENSMUST00000069187 Fam43aQ8BUP8 424 aa13.88□□□□□ -0.19
Trim23-203ENSMUST00000069187 Ccdc94Q9D6J3 314 aa13.88□□□□□ -0.19
Trim23-203ENSMUST00000069187 Rcan3Q9JKK0 239 aa13.88□□□□□ -0.19
Trim23-203ENSMUST00000069187 Fam50bQ9WTJ8 334 aa13.88□□□□□ -0.19
Trim23-203ENSMUST00000069187 Cc2d1aQ8K1A6 943 aa13.88□□□□□ -0.19
Trim23-203ENSMUST00000069187 Dmrtc1Q9D9R7 182 aa13.88□□□□□ -0.19
Trim23-203ENSMUST00000069187 Vsig10D3YX43 558 aa13.87□□□□□ -0.19
Trim23-203ENSMUST00000069187 Dhx30Q99PU8 1217 aaKnown RBP13.87□□□□□ -0.19
Trim23-203ENSMUST00000069187 CarsQ9ER72 831 aaKnown RBP13.87□□□□□ -0.19
Trim23-203ENSMUST00000069187 Fbxo2Q80UW2 297 aa13.87□□□□□ -0.19
Trim23-203ENSMUST00000069187 Aldh8a1Q8BH00 487 aa13.87□□□□□ -0.19
Trim23-203ENSMUST00000069187 Elp1Q7TT37 1333 aaKnown RBP13.87□□□□□ -0.19
Trim23-203ENSMUST00000069187 Scn7aB1AYL1 1681 aa13.87□□□□□ -0.19
Trim23-203ENSMUST00000069187 Prim1P20664 417 aa13.87□□□□□ -0.19
Trim23-203ENSMUST00000069187 Mcm2P97310 904 aa13.87□□□□□ -0.19
Trim23-203ENSMUST00000069187 Ccdc173A0JLY1 547 aa13.86□□□□□ -0.19
Trim23-203ENSMUST00000069187 Tbc1d31Q6NXY1 996 aa13.86□□□□□ -0.19
Trim23-203ENSMUST00000069187 Ppip5k2Q6ZQB6 1129 aa13.86□□□□□ -0.19
Trim23-203ENSMUST00000069187 Gys2Q8VCB3 704 aa13.86□□□□□ -0.19
Trim23-203ENSMUST00000069187 Nfat5Q9WV30 1534 aa13.86□□□□□ -0.19
Trim23-203ENSMUST00000069187 Wnk3Q80XP9 1757 aa13.86□□□□□ -0.19
Trim23-203ENSMUST00000069187 Zscan25B2RX31 543 aa13.86□□□□□ -0.19
Trim23-203ENSMUST00000069187 Ankrd44B2RXR6 993 aa13.86□□□□□ -0.19
Trim23-203ENSMUST00000069187 Pank2Q3U4S0 443 aa13.86□□□□□ -0.19
Trim23-203ENSMUST00000069187 Anp32cQ64G17 123 aa13.86□□□□□ -0.19
Trim23-203ENSMUST00000069187 Gcc1Q9D4H2 778 aa13.86□□□□□ -0.19
Trim23-203ENSMUST00000069187 Plekhm2Q80TQ5 1018 aa13.85□□□□□ -0.19
Trim23-203ENSMUST00000069187 Smim5Q8BT42 78 aa13.85□□□□□ -0.19
Trim23-203ENSMUST00000069187 4930572O03RikQ8C5Y0 211 aa13.85□□□□□ -0.19
Trim23-203ENSMUST00000069187 Gtf3c5Q8R2T8 520 aa13.85□□□□□ -0.19
Trim23-203ENSMUST00000069187 HnrnpuQ8VEK3 800 aaKnown RBP13.85□□□□□ -0.19
Trim23-203ENSMUST00000069187 Gm9992B2RWK3 458 aa13.85□□□□□ -0.19
Trim23-203ENSMUST00000069187 Unc93aQ710D3 458 aa13.85□□□□□ -0.19
Trim23-203ENSMUST00000069187 Gripap1Q8VD04 806 aa13.85□□□□□ -0.19
Trim23-203ENSMUST00000069187 Vamp4O70480 141 aa13.85□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms