RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Sytl4Q9R0Q1 673 aa12.98□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Trim34bJ3QNR8 485 aa12.98□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Syce3B5KM66 88 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Shq1Q7TMX5 569 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Pms1Q8K119 917 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 FanciQ8K368 1330 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Nectin2P32507 530 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Zpr1Q62384 459 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Ccdc186Q8C9S4 917 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Snw1Q9CSN1 536 aaKnown RBP12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Neurog2P70447 263 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Stk11ipQ3TAA7 1072 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Hdhd2Q3UGR5 259 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Mterf4Q8BVN4 346 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Filip1Q9CS72 1211 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Rasal2E9PW37 1286 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Speer4f2E9Q366 295 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Gsdma2Q32M21 443 aa12.97□□□□□ -0.33
Rtn3-202ENSMUST00000065304 FerP70451 823 aa12.96□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Smarcad1Q04692 1021 aa12.96□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Sh3d21Q7TSG5 549 aa12.96□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Vps36Q91XD6 386 aa12.96□□□□□ -0.33
Rtn3-202ENSMUST00000065304 Cavin4A2AMM0 362 aa12.96□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Atp2a2O55143 1044 aaKnown RBP12.96□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Rad23bP54728 416 aa12.96□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Psmc4P54775 418 aa12.96□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Prpf40aQ9R1C7 953 aaKnown RBP12.96□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Kif2aP28740 705 aa12.96□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Dnajc2P54103 621 aaKnown RBP12.96□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Ankrd49Q8VE42 238 aa12.96□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Golga1Q9CW79 758 aa12.96□□□□□ -0.34
Rtn3-202ENSMUST00000065304 UacaQ8CGB3 1411 aa12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Kif5cP28738 956 aaKnown RBP12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Nek5Q7TSC3 627 aa12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Mink1Q9JM52 1308 aa12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Fermt1P59113 677 aa12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 SkiQ60698 725 aa12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Sept14Q9DA97 430 aa12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Rcan3Q9JKK0 239 aa12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Tagap1P0CAX8 505 aa12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Fgfr1opQ66JX5 399 aa12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Armc9Q9D2I5 817 aa12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 ScaperF8VQ70 1398 aaKnown RBP12.95□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Stmn1P54227 149 aaKnown RBP12.94□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Sirt1Q923E4 737 aa12.94□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Gsto1O09131 240 aa12.94□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Fam204aQ8C6C7 236 aa12.94□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Zkscan7E9PVW1 718 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Nfxl1E9Q8I7 918 aaKnown RBP12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Cacna2d4Q5RJF7 1116 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Bms1Q6PGF5 1284 aaKnown RBP12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Rassf2Q8BMS9 326 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Ssx2ipQ8VC66 615 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Riok1Q922Q2 567 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Dhx29Q6PGC1 1365 aaKnown RBP12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Nucb2P81117 420 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Rbm33Q9CXK9 1231 aaKnown RBP12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Usp47Q8BY87 1376 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Setdb1O88974 1307 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Opa1P58281 960 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Gng11P61953 73 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Mxra7Q9CZH7 178 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Uchl5Q9WUP7 329 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Ccdc152E9PX14 254 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Serpinb6bO08804 377 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Cnnm1Q0GA42 951 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Gas8Q60779 478 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Soga3Q6NZL0 945 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Nutm1Q8BHP2 1126 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Ccdc12Q8R344 166 aaKnown RBP12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Mx2Q9WVP9 655 aa12.93□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Klf15Q9EPW2 415 aa12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 DonsonQ9QXP4 560 aa12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Cfap69Q8BH53 942 aa12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Ccdc14Q8K2J4 934 aa12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Vps18Q8R307 973 aa12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Yeats4Q9CR11 227 aaKnown RBP12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Riok3Q9DBU3 519 aaKnown RBP12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 RpgrQ9R0X5 1001 aa12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Sdc2P43407 202 aa12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Bcl2l13P59017 434 aa12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Ddx19aQ61655 478 aaKnown RBP12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Ccdc148Q6P5U8 527 aa12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Trim34aQ99PP6 485 aa12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Sart1Q9Z315 806 aaKnown RBP12.92□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Stmn2P55821 179 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Ccdc124Q9D8X2 217 aaKnown RBP12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 AknaQ80VW7 1404 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Stx1aO35526 288 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Spty2d1Q68FG3 682 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Fam177a1Q8BR63 207 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Speer3W4VSP1 261 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Usp37Q8C0R0 979 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Apbb1ipQ8R5A3 670 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Kif18aQ91WD7 886 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Sil1Q9EPK6 465 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Tbc1d2bQ3U0J8 965 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Cep135Q6P5D4 1140 aa12.91□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Ampd3O08739 766 aa12.9□□□□□ -0.34
Rtn3-202ENSMUST00000065304 Ift74Q8BKE9 600 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms