Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Gm25239-201ENSMUST00000174915 86 ntBASIC45.19■■■■■ 4.82
Psmc4P54775 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.03■■■■■ 4.32
Psmc4P54775 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.4■■■■■ 4.22
Psmc4P54775 Gm24109-201ENSMUST00000175489 103 ntBASIC39.42■■■■□ 3.9
Psmc4P54775 Gm15042-201ENSMUST00000120212 883 ntBASIC38.98■■■■□ 3.83
Psmc4P54775 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.18■■■■□ 3.7
Psmc4P54775 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
Psmc4P54775 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
Psmc4P54775 Gm15045-201ENSMUST00000117359 883 ntBASIC38.01■■■■□ 3.68
Psmc4P54775 Gm23366-201ENSMUST00000175022 89 ntBASIC37.67■■■■□ 3.62
Psmc4P54775 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Psmc4P54775 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.96■■■■□ 3.51
Psmc4P54775 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.62■■■■□ 3.45
Psmc4P54775 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.56■■■■□ 3.44
Psmc4P54775 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Psmc4P54775 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Psmc4P54775 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Psmc4P54775 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.13■■■■□ 3.37
Psmc4P54775 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Psmc4P54775 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Psmc4P54775 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.89■■■■□ 3.34
Psmc4P54775 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Psmc4P54775 Gm25238-201ENSMUST00000174914 89 ntBASIC35.84■■■■□ 3.33
Psmc4P54775 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Psmc4P54775 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
Psmc4P54775 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
Psmc4P54775 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Psmc4P54775 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
Psmc4P54775 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Psmc4P54775 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.85■■■■□ 3.17
Psmc4P54775 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.84■■■■□ 3.17
Psmc4P54775 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.17
Psmc4P54775 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.63■■■■□ 3.13
Psmc4P54775 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.62■■■■□ 3.13
Psmc4P54775 Gm25262-201ENSMUST00000174934 133 ntBASIC34.61■■■■□ 3.13
Psmc4P54775 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.61■■■■□ 3.13
Psmc4P54775 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Psmc4P54775 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
Psmc4P54775 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Psmc4P54775 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.28■■■■□ 3.08
Psmc4P54775 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.27■■■■□ 3.08
Psmc4P54775 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.09■■■■□ 3.05
Psmc4P54775 Gm27325-201ENSMUST00000175467 74 ntBASIC34.07■■■■□ 3.04
Psmc4P54775 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.02■■■■□ 3.04
Psmc4P54775 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Psmc4P54775 Gm26115-201ENSMUST00000175605 87 ntBASIC33.96■■■■□ 3.03
Psmc4P54775 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.91■■■■□ 3.02
Psmc4P54775 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.9■■■■□ 3.02
Psmc4P54775 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Psmc4P54775 Rab21-202ENSMUST00000218831 843 ntBASIC33.79■■■■□ 3
Psmc4P54775 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.77■■■■□ 3
Psmc4P54775 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
Psmc4P54775 Gm8109-201ENSMUST00000194076 746 ntBASIC33.7■■■□□ 2.99
Psmc4P54775 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Psmc4P54775 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Psmc4P54775 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
Psmc4P54775 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Psmc4P54775 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Psmc4P54775 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Psmc4P54775 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Psmc4P54775 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.44■■■□□ 2.94
Psmc4P54775 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.34■■■□□ 2.93
Psmc4P54775 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.33■■■□□ 2.93
Psmc4P54775 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.24■■■□□ 2.91
Psmc4P54775 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.17■■■□□ 2.9
Psmc4P54775 Psd-208ENSMUST00000224556 2034 ntBASIC33.16■■■□□ 2.9
Psmc4P54775 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Psmc4P54775 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Psmc4P54775 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Psmc4P54775 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Psmc4P54775 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.87■■■□□ 2.85
Psmc4P54775 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Psmc4P54775 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.85■■■□□ 2.85
Psmc4P54775 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Psmc4P54775 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Psmc4P54775 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.8■■■□□ 2.84
Psmc4P54775 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.78■■■□□ 2.84
Psmc4P54775 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Psmc4P54775 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.69■■■□□ 2.82
Psmc4P54775 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Psmc4P54775 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.65■■■□□ 2.82
Psmc4P54775 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.58■■■□□ 2.81
Psmc4P54775 Gm24804-201ENSMUST00000174982 85 ntBASIC32.55■■■□□ 2.8
Psmc4P54775 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
Psmc4P54775 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.43■■■□□ 2.78
Psmc4P54775 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.42■■■□□ 2.78
Psmc4P54775 Gm27322-201ENSMUST00000184007 104 ntBASIC32.39■■■□□ 2.78
Psmc4P54775 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Psmc4P54775 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
Psmc4P54775 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Psmc4P54775 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.3■■■□□ 2.76
Psmc4P54775 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Psmc4P54775 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.24■■■□□ 2.75
Psmc4P54775 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
Psmc4P54775 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.23■■■□□ 2.75
Psmc4P54775 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
Psmc4P54775 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Psmc4P54775 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Psmc4P54775 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Psmc4P54775 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms