RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Klhdc4Q921I2 584 aa14.98□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Senp3Q9EP97 568 aaKnown RBP14.98□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Ric1Q69ZJ7 1422 aa14.98□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Gpr150Q8BL07 427 aa14.97□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Sumf1Q8R0F3 372 aa14.97□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 En2P09066 324 aa14.96□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Hmgb2P30681 210 aaKnown RBP14.96□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Prom2Q3UUY6 835 aa14.96□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 ErfeQ6PGN1 340 aa14.96□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Trpc5Q9QX29 975 aa14.96□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Adcy9P51830 1353 aa14.96□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Msl1Q6PDM1 616 aa14.95□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Pdia6Q922R8 440 aaKnown RBP14.95□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Irx6Q9ER75 438 aa14.95□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Col4a1P02463 1669 aa14.95□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Eif4a1P60843 406 aaKnown RBP14.94□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Jdp2P97875 163 aa14.94□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Col23a1Q8K4G2 532 aa14.94□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Atxn3Q9CVD2 355 aa14.94□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Foxp4Q9DBY0 795 aaKnown RBP14.94□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Tiam2Q6ZPF3 1715 aa14.93□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Stra8P70278 393 aa14.93□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Iqsec3Q3TES0 1195 aa14.93□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Sned1Q70E20 1403 aa14.92□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 CrbnQ8C7D2 445 aa14.92□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Zbtb1Q91VL9 713 aa14.92□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 IncenpQ9WU62 880 aa14.92□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Spata31d1bE9QA57 1361 aa14.92□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Col1a2Q01149 1372 aa14.92□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Pibf1E9Q6K3 756 aa14.91□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 NppbP40753 121 aa14.91□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Tlr8P58682 1032 aa14.91□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Pde4dQ01063 747 aa14.91□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Prkab2Q6PAM0 271 aa14.91□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 CpzQ8R4V4 654 aa14.91□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Kndc1Q0KK55 1742 aa14.9□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Magea1O89006 320 aa14.9□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Magea5O89009 320 aa14.9□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Mylk2Q8VCR8 613 aa14.9□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Chrna2Q91X60 512 aa14.9□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Magea2Q9R2A2 320 aa14.9□□□□□ -0.02
Ccdc28b-201ENSMUST00000030586 Bcl2l13P59017 434 aa14.89□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Cnnm1Q0GA42 951 aa14.89□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Gm12185Q5NCB2 835 aa14.89□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 DiexfQ8BTT6 772 aaKnown RBP14.89□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 RtcbQ99LF4 505 aaKnown RBP14.89□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Kcnq2Q9Z351 759 aa14.89□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Myo5bP21271 1818 aa14.89□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Tnnt1O88346 262 aa14.88□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Ubxn2bQ0KL01 331 aa14.88□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Mak16Q8BGS0 296 aaKnown RBP14.88□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Ncbp3Q8BZR9 615 aaKnown RBP14.88□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Trip6Q9Z1Y4 480 aa14.88□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 MetP16056 1379 aa14.87□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 C4bP01029 1738 aa14.87□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Supt5hO55201 1082 aaKnown RBP14.87□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Rad23bP54728 416 aa14.87□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Lrrc43Q3V0L5 667 aa14.87□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Neurod2Q62414 383 aa14.87□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Srp68Q8BMA6 625 aaKnown RBP14.87□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Slc39a6Q8C145 765 aa14.87□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 GckrQ91X44 587 aa14.87□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Nav1Q8CH77 1875 aa14.86□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Fkbp4P30416 458 aa14.86□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Igfbp6P47880 238 aa14.86□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Chpf2Q3UU43 768 aa14.86□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 U2surpQ6NV83 1029 aaKnown RBP14.86□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 NrdcQ8BHG1 1161 aa14.86□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Nip7Q9CXK8 180 aaKnown RBP14.86□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 TefQ9JLC6 301 aa14.86□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Taf7Q9R1C0 341 aa14.86□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Atp1b3P97370 278 aa14.85□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 1810065E05RikQ5NC41 235 aa14.85□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Gas2l2Q5SSG4 860 aa14.85□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Amhr2Q8K592 568 aa14.85□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Flad1Q8R123 492 aa14.85□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 HmcesQ8R1M0 353 aaKnown RBP14.85□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Gigyf1Q99MR1 1044 aaKnown RBP14.85□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Cdc37l1Q9CZP7 335 aa14.85□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Speer4f1Q9D5Q6 258 aa14.85□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Lrp5Q91VN0 1614 aa14.84□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Ubr3Q5U430 1889 aa14.84□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 1700019A02RikA0A087WPV9 146 aa14.84□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Mtfr1lQ9CWE0 289 aa14.84□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Col11a2Q64739 1736 aa14.83□□□□□ -0.03
Ccdc28b-201ENSMUST00000030586 Prr5lA2AVJ5 370 aa14.83□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Gnai1B2RSH2 354 aa14.83□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Atf5O70191 283 aa14.83□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Slurp2P0DP59 97 aa14.83□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Strn4P58404 760 aa14.83□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Rad21Q61550 635 aaKnown RBP14.83□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Usp16Q99LG0 825 aa14.83□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Pcgf6Q99NA9 353 aa14.83□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Tktl2Q9D4D4 627 aa14.83□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Gnai3Q9DC51 354 aa14.83□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Dpf1Q9QX66 387 aa14.82□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Ttc21aQ8C0S4 1314 aa14.82□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Zswim8Q3UHH1 1832 aaKnown RBP14.81□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 SympkQ80X82 1284 aa14.81□□□□□ -0.04
Ccdc28b-201ENSMUST00000030586 Tmem119Q8R138 280 aa14.8□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms