RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 TefQ9JLC6 301 aa9.41□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Smc5Q8CG46 1101 aaKnown RBP9.41□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Ginm1Q91WR6 327 aa9.41□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Ttc21aQ8C0S4 1314 aa9.41□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Clcn1Q64347 994 aa9.41□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Ipo9Q91YE6 1041 aa9.41□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Sart3Q9JLI8 962 aaKnown RBP9.41□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Ccdc171E9Q1U1 1324 aa9.41□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Spryd3E9Q9B3 442 aa9.4□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 4933416C03RikQ3V063 378 aa9.4□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Fam83gQ5SWY7 812 aa9.4□□□□□ -0.9
Crnkl1-201ENSMUST00000001818 Nfat5Q9WV30 1534 aa9.4□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Kdm2bQ6P1G2 1309 aa9.4□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Bicdl1A0JNT9 577 aa9.4□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 PsapQ61207 557 aaKnown RBP9.4□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Slc39a6Q8C145 765 aa9.4□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Efcab2Q9CQ46 164 aa9.4□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 PigbQ9JJQ0 542 aa9.4□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Fbxo41Q6NS60 873 aa9.39□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Map2P20357 1828 aa9.39□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Nkx2-3P97334 362 aa9.39□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Chmp4cQ9D7F7 232 aa9.39□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Prkab2Q6PAM0 271 aa9.38□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Klc3Q91W40 508 aa9.38□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 GckrQ91X44 587 aa9.38□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Vsig10D3YX43 558 aa9.38□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Smarca5Q91ZW3 1051 aaKnown RBP9.38□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Aox2Q5SGK3 1345 aa9.38□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Ubr1O70481 1757 aa9.38□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Foxp4Q9DBY0 795 aaKnown RBP9.38□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Ccdc183A2AJB1 534 aa9.37□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Eif4a1P60843 406 aaKnown RBP9.37□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Cog6Q8R3I3 657 aa9.37□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Map3k13Q1HKZ5 959 aa9.37□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Cyp2d12Q8BVD2 504 aa9.37□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Ncbp3Q8BZR9 615 aaKnown RBP9.37□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Exoc6bA6H5Z3 810 aa9.37□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 CalcaP70160 136 aa9.37□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Ipo8Q7TMY7 1010 aa9.37□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Jmjd4Q8BFT6 427 aa9.37□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Fam135bQ9DAI6 1403 aa9.36□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Cfdp1O88271 295 aaKnown RBP9.36□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Taok3Q8BYC6 898 aa9.36□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Dnai1Q8C0M8 701 aa9.36□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Flad1Q8R123 492 aa9.36□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Wnk3Q80XP9 1757 aa9.36□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Cap2Q9CYT6 476 aa9.36□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Cntnap1O54991 1385 aa9.35□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Mphosph10Q810V0 681 aaKnown RBP9.35□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Miga2Q8BK03 593 aa9.35□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Taf7Q9R1C0 341 aa9.35□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Hdac6Q9Z2V5 1149 aa9.35□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Nsd3Q6P2L6 1439 aa9.35□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Kcnh4A2A5F7 1018 aa9.34□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Jarid2Q62315 1234 aa9.34□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Aldh1l1Q8R0Y6 902 aa9.34□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Ints5Q8CHT3 1018 aa9.34□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Strn4P58404 760 aa9.34□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Uhrf1bp1B2KF50 1429 aa9.34□□□□□ -0.91
Crnkl1-201ENSMUST00000001818 Slit1Q80TR4 1531 aa9.33□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Dcaf5Q80T85 946 aa9.33□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 SympkQ80X82 1284 aa9.33□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Ssfa2Q922B9 1252 aa9.33□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Nip7Q9CXK8 180 aaKnown RBP9.33□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Ppfibp2O35711 882 aa9.33□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Kif18aQ91WD7 886 aa9.33□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Chrna2Q91X60 512 aa9.33□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Atf5O70191 283 aa9.32□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Kiaa0319Q5SZV5 1081 aa9.32□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Ppp2r3aB2RXC8 1150 aa9.32□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Slc4a10Q5DTL9 1118 aa9.32□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Syde2E9PUP1 1314 aa9.32□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Rfx1P48377 963 aa9.31□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Chl1P70232 1209 aa9.31□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Ankrd13dQ6PD24 605 aa9.31□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Zcrb1Q9CZ96 217 aaKnown RBP9.31□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Nek4Q9Z1J2 792 aa9.31□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Zap70P43404 618 aa9.31□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Map3k2Q61083 619 aa9.31□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 MvpQ9EQK5 861 aa9.31□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Abcc12Q80WJ6 1366 aa9.31□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 AceP09470 1312 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Hspa2P17156 633 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Prkar2bP31324 416 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Col1a2Q01149 1372 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Spef2Q8C9J3 1734 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 FanclQ9CR14 375 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Chmp4bQ9D8B3 224 aaKnown RBP9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Ttll7A4Q9F0 912 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 SkilQ60665 675 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Irf9Q61179 399 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Ankib1Q6ZPS6 1085 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Tnpo1Q8BFY9 898 aaKnown RBP9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Atg3Q9CPX6 314 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Smarcc1P97496 1104 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Iqsec3Q3TES0 1195 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 BcanQ61361 883 aa9.3□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Ptpn23Q6PB44 1692 aa9.29□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Slit2Q9R1B9 1521 aa9.29□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Vps33bP59016 617 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms