Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPRKBQ9Y3C4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TPRKBQ9Y3C4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
TPRKBQ9Y3C4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
TPRKBQ9Y3C4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
TPRKBQ9Y3C4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TPRKBQ9Y3C4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TPRKBQ9Y3C4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TPRKBQ9Y3C4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 AL589743.5-201ENST00000616611 1050 ntBASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.14■□□□□ 0.33
TPRKBQ9Y3C4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 AC135776.1-201ENST00000319817 2481 ntBASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 AC138028.4-201ENST00000564984 1845 ntBASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 KRT18P14-201ENST00000534205 1250 ntBASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRKBQ9Y3C4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms