Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KCNIP3Q9Y2W7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.72■□□□□ 0.11
KCNIP3Q9Y2W7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
KCNIP3Q9Y2W7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KCNIP3Q9Y2W7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KCNIP3Q9Y2W7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KCNIP3Q9Y2W7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
KCNIP3Q9Y2W7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
KCNIP3Q9Y2W7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KCNIP3Q9Y2W7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KCNIP3Q9Y2W7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 AC137761.2-201ENST00000561729 223 ntBASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 AC145350.3-201ENST00000569033 163 ntBASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
KCNIP3Q9Y2W7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KCNIP3Q9Y2W7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.71■□□□□ 0.1
KCNIP3Q9Y2W7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.71■□□□□ 0.1
KCNIP3Q9Y2W7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
KCNIP3Q9Y2W7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KCNIP3Q9Y2W7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KCNIP3Q9Y2W7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KCNIP3Q9Y2W7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 LSM12P1-201ENST00000411836 588 ntBASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 CYP2T1P-201ENST00000432607 1285 ntBASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 DUX4L16-201ENST00000555130 1264 ntBASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KCNIP3Q9Y2W7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 KRT17P1-201ENST00000399211 1546 ntBASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 AP006587.1-201ENST00000534129 1502 ntBASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 GPX1P1-201ENST00000388829 606 ntBASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KCNIP3Q9Y2W7 AL512625.2-201ENST00000417533 625 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms