Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 HOXB1-202ENST00000577092 1414 ntBASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.14■□□□□ 0.82
UBQLN1Q9UMX0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.14■□□□□ 0.82
UBQLN1Q9UMX0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
UBQLN1Q9UMX0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 KRT18P23-201ENST00000435622 1283 ntBASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 AC034232.1-201ENST00000506026 1064 ntBASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 AC083906.6-201ENST00000641366 219 ntBASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN1Q9UMX0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 AC034236.2-201ENST00000606662 1610 ntBASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 AL031133.1-201ENST00000406807 723 ntBASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 SEC1P-202ENST00000473944 940 ntBASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN1Q9UMX0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 SPDYE15P-201ENST00000424157 909 ntBASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 AL671277.2-201ENST00000458060 996 ntBASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms