Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC29.83■■■□□ 2.37
RIMBP3Q9UFD9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC29.83■■■□□ 2.37
RIMBP3Q9UFD9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
RIMBP3Q9UFD9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
RIMBP3Q9UFD9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC29.83■■■□□ 2.37
RIMBP3Q9UFD9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
RIMBP3Q9UFD9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RIMBP3Q9UFD9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC29.82■■■□□ 2.37
RIMBP3Q9UFD9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC29.82■■■□□ 2.36
RIMBP3Q9UFD9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC29.82■■■□□ 2.36
RIMBP3Q9UFD9 AC069262.1-201ENST00000539058 672 ntBASIC29.82■■■□□ 2.36
RIMBP3Q9UFD9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
RIMBP3Q9UFD9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RIMBP3Q9UFD9 FP700111.2-201ENST00000619190 1892 ntBASIC29.82■■■□□ 2.36
RIMBP3Q9UFD9 INTS4P1-201ENST00000438455 1935 ntBASIC29.82■■■□□ 2.36
RIMBP3Q9UFD9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RIMBP3Q9UFD9 AJ011932.1-201ENST00000621707 465 ntBASIC29.82■■■□□ 2.36
RIMBP3Q9UFD9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 AL356309.3-201ENST00000624132 1934 ntBASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 AC087641.1-201ENST00000557561 1021 ntBASIC29.81■■■□□ 2.36
RIMBP3Q9UFD9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 AC112777.1-201ENST00000540175 1423 ntBASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RIMBP3Q9UFD9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 CD82-202ENST00000342935 967 ntTSL 5 BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 AC092865.6-201ENST00000642101 219 ntBASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 AL024507.2-201ENST00000606070 2574 ntBASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC29.79■■■□□ 2.36
RIMBP3Q9UFD9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 GAPDHP21-201ENST00000450301 1010 ntBASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 AC079834.2-201ENST00000609776 1949 ntBASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC29.78■■■□□ 2.36
RIMBP3Q9UFD9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 MTDHP4-201ENST00000600287 670 ntBASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RIMBP3Q9UFD9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RIMBP3Q9UFD9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC29.76■■■□□ 2.35
RIMBP3Q9UFD9 ABCD1P5-201ENST00000445663 754 ntBASIC29.76■■■□□ 2.35
RIMBP3Q9UFD9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC29.76■■■□□ 2.35
RIMBP3Q9UFD9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC29.76■■■□□ 2.35
RIMBP3Q9UFD9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RIMBP3Q9UFD9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 PLK5-205ENST00000642079 1969 ntBASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms