Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD1Q9NXG2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THUMPD1Q9NXG2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 KRASP1-201ENST00000407852 552 ntBASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 PRSS44-201ENST00000515154 1146 ntBASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 AC110285.5-201ENST00000611501 352 ntBASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 NOC2LP2-201ENST00000407594 1944 ntBASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
THUMPD1Q9NXG2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 Z85996.1-201ENST00000494644 937 ntBASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 AL023875.1-201ENST00000640777 796 ntBASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
THUMPD1Q9NXG2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
THUMPD1Q9NXG2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THUMPD1Q9NXG2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
THUMPD1Q9NXG2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
THUMPD1Q9NXG2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THUMPD1Q9NXG2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms