Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 AC099398.1-201ENST00000567919 2776 ntBASIC19.71■□□□□ 0.75
CD248Q9HCU0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.71■□□□□ 0.75
CD248Q9HCU0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.71■□□□□ 0.75
CD248Q9HCU0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.71■□□□□ 0.75
CD248Q9HCU0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.71■□□□□ 0.75
CD248Q9HCU0 ECEL1P2-202ENST00000465689 757 ntBASIC19.71■□□□□ 0.75
CD248Q9HCU0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.71■□□□□ 0.75
CD248Q9HCU0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.71■□□□□ 0.75
CD248Q9HCU0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CD248Q9HCU0 AC139713.2-201ENST00000641328 2723 ntBASIC19.71■□□□□ 0.75
CD248Q9HCU0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CD248Q9HCU0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.71■□□□□ 0.75
CD248Q9HCU0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CD248Q9HCU0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD248Q9HCU0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.71■□□□□ 0.75
CD248Q9HCU0 AC096733.2-201ENST00000609937 1394 ntBASIC19.7■□□□□ 0.74
CD248Q9HCU0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CD248Q9HCU0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.7■□□□□ 0.74
CD248Q9HCU0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.7■□□□□ 0.74
CD248Q9HCU0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.7■□□□□ 0.74
CD248Q9HCU0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 CRYGFP-201ENST00000418459 633 ntBASIC19.7■□□□□ 0.74
CD248Q9HCU0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.7■□□□□ 0.74
CD248Q9HCU0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.7■□□□□ 0.74
CD248Q9HCU0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.7■□□□□ 0.74
CD248Q9HCU0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.7■□□□□ 0.74
CD248Q9HCU0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.7■□□□□ 0.74
CD248Q9HCU0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.7■□□□□ 0.74
CD248Q9HCU0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD248Q9HCU0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD248Q9HCU0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CD248Q9HCU0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD248Q9HCU0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD248Q9HCU0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.69■□□□□ 0.74
CD248Q9HCU0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CD248Q9HCU0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD248Q9HCU0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CD248Q9HCU0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.69■□□□□ 0.74
CD248Q9HCU0 Z85996.1-201ENST00000494644 937 ntBASIC19.69■□□□□ 0.74
CD248Q9HCU0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD248Q9HCU0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD248Q9HCU0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD248Q9HCU0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.69■□□□□ 0.74
CD248Q9HCU0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD248Q9HCU0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD248Q9HCU0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD248Q9HCU0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CD248Q9HCU0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.68■□□□□ 0.74
CD248Q9HCU0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD248Q9HCU0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.68■□□□□ 0.74
CD248Q9HCU0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CD248Q9HCU0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CD248Q9HCU0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.68■□□□□ 0.74
CD248Q9HCU0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
CD248Q9HCU0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CD248Q9HCU0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD248Q9HCU0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.68■□□□□ 0.74
CD248Q9HCU0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD248Q9HCU0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD248Q9HCU0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD248Q9HCU0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.68■□□□□ 0.74
CD248Q9HCU0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.68■□□□□ 0.74
CD248Q9HCU0 AC011298.2-201ENST00000617989 482 ntBASIC19.68■□□□□ 0.74
CD248Q9HCU0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD248Q9HCU0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD248Q9HCU0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms