Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 Z99916.2-201ENST00000604037 246 ntBASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 AL162741.1-201ENST00000565563 1558 ntBASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NUCKS1Q9H1E3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 Z85996.1-201ENST00000494644 937 ntBASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.36■□□□□ 0.85
NUCKS1Q9H1E3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 RPS2P4-201ENST00000476944 856 ntBASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 MYC-208ENST00000641036 567 ntBASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 AC007613.1-201ENST00000572811 2597 ntBASIC20.35■□□□□ 0.85
NUCKS1Q9H1E3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.34■□□□□ 0.85
NUCKS1Q9H1E3 PRSS44-201ENST00000515154 1146 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms