Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRDL1Q9BU40 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 AL161938.1-201ENST00000569833 2180 ntBASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRDL1Q9BU40 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 CROCCP3-202ENST00000420820 1947 ntBASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 C1QL1P1-201ENST00000568105 661 ntBASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 RN7SL471P-201ENST00000580476 299 ntBASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CHRDL1Q9BU40 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms