Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 C17orf82-201ENST00000623772 1530 ntBASIC13.13□□□□□ -0.31
VPS25Q9BRG1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS25Q9BRG1 AC008764.6-201ENST00000595909 2069 ntBASIC13.12□□□□□ -0.31
VPS25Q9BRG1 AL645608.8-201ENST00000606034 2086 ntBASIC13.12□□□□□ -0.31
VPS25Q9BRG1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 AL731571.1-201ENST00000617058 5428 ntBASIC13.12□□□□□ -0.31
VPS25Q9BRG1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 ABALON-201ENST00000629058 1903 ntBASIC13.12□□□□□ -0.31
VPS25Q9BRG1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS25Q9BRG1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 AC009102.2-201ENST00000606772 1639 ntBASIC13.11□□□□□ -0.31
VPS25Q9BRG1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 CICP14-201ENST00000629111 2732 ntBASIC13.11□□□□□ -0.31
VPS25Q9BRG1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 OR2I1P-210ENST00000642037 4691 ntBASIC13.11□□□□□ -0.31
VPS25Q9BRG1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS25Q9BRG1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms