Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SMOQ99835 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SMOQ99835 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.71■□□□□ 0.75
SMOQ99835 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.71■□□□□ 0.75
SMOQ99835 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SMOQ99835 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
SMOQ99835 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.71■□□□□ 0.75
SMOQ99835 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMOQ99835 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMOQ99835 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMOQ99835 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.7■□□□□ 0.74
SMOQ99835 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMOQ99835 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.7■□□□□ 0.74
SMOQ99835 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMOQ99835 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMOQ99835 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SMOQ99835 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.7■□□□□ 0.74
SMOQ99835 KRT18P38-201ENST00000449496 1282 ntBASIC19.7■□□□□ 0.74
SMOQ99835 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.7■□□□□ 0.74
SMOQ99835 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.7■□□□□ 0.74
SMOQ99835 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SMOQ99835 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.7■□□□□ 0.74
SMOQ99835 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.7■□□□□ 0.74
SMOQ99835 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMOQ99835 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMOQ99835 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMOQ99835 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.69■□□□□ 0.74
SMOQ99835 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMOQ99835 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.69■□□□□ 0.74
SMOQ99835 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SMOQ99835 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.69■□□□□ 0.74
SMOQ99835 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.69■□□□□ 0.74
SMOQ99835 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.69■□□□□ 0.74
SMOQ99835 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.69■□□□□ 0.74
SMOQ99835 SEC1P-202ENST00000473944 940 ntBASIC19.69■□□□□ 0.74
SMOQ99835 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.69■□□□□ 0.74
SMOQ99835 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.69■□□□□ 0.74
SMOQ99835 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.69■□□□□ 0.74
SMOQ99835 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 AC112497.1-201ENST00000624824 639 ntBASIC19.69■□□□□ 0.74
SMOQ99835 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SMOQ99835 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.69■□□□□ 0.74
SMOQ99835 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMOQ99835 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.68■□□□□ 0.74
SMOQ99835 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 Z98044.1-201ENST00000632503 1764 ntBASIC19.68■□□□□ 0.74
SMOQ99835 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.68■□□□□ 0.74
SMOQ99835 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.68■□□□□ 0.74
SMOQ99835 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.68■□□□□ 0.74
SMOQ99835 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
SMOQ99835 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.68■□□□□ 0.74
SMOQ99835 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMOQ99835 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMOQ99835 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMOQ99835 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMOQ99835 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMOQ99835 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMOQ99835 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.67■□□□□ 0.74
SMOQ99835 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMOQ99835 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMOQ99835 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMOQ99835 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMOQ99835 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMOQ99835 KRT18P23-201ENST00000435622 1283 ntBASIC19.67■□□□□ 0.74
SMOQ99835 HOMER2P1-201ENST00000455653 964 ntBASIC19.67■□□□□ 0.74
SMOQ99835 AL359075.1-203ENST00000462729 1002 ntBASIC19.67■□□□□ 0.74
SMOQ99835 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.67■□□□□ 0.74
SMOQ99835 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.67■□□□□ 0.74
SMOQ99835 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMOQ99835 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.67■□□□□ 0.74
SMOQ99835 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMOQ99835 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms