Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ITCHQ96J02 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ITCHQ96J02 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.91■□□□□ 0.46
ITCHQ96J02 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.91■□□□□ 0.46
ITCHQ96J02 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.91■□□□□ 0.46
ITCHQ96J02 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.91■□□□□ 0.46
ITCHQ96J02 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ITCHQ96J02 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.91■□□□□ 0.46
ITCHQ96J02 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
ITCHQ96J02 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ITCHQ96J02 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.9■□□□□ 0.46
ITCHQ96J02 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 HEIH-201ENST00000623091 1652 ntBASIC17.9■□□□□ 0.46
ITCHQ96J02 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ITCHQ96J02 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ITCHQ96J02 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.9■□□□□ 0.46
ITCHQ96J02 KRT8P41-201ENST00000533985 1514 ntBASIC17.9■□□□□ 0.46
ITCHQ96J02 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.9■□□□□ 0.46
ITCHQ96J02 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ITCHQ96J02 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.9■□□□□ 0.46
ITCHQ96J02 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ITCHQ96J02 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.89■□□□□ 0.46
ITCHQ96J02 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.89■□□□□ 0.45
ITCHQ96J02 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ITCHQ96J02 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ITCHQ96J02 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ITCHQ96J02 AC126763.1-201ENST00000552015 2118 ntBASIC17.89■□□□□ 0.45
ITCHQ96J02 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 RCC2P6-201ENST00000526625 1557 ntBASIC17.89■□□□□ 0.45
ITCHQ96J02 NOC2LP1-202ENST00000452600 2235 ntBASIC17.89■□□□□ 0.45
ITCHQ96J02 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.89■□□□□ 0.45
ITCHQ96J02 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
ITCHQ96J02 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.89■□□□□ 0.45
ITCHQ96J02 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ITCHQ96J02 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ITCHQ96J02 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.89■□□□□ 0.45
ITCHQ96J02 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.89■□□□□ 0.45
ITCHQ96J02 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITCHQ96J02 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.89■□□□□ 0.45
ITCHQ96J02 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.88■□□□□ 0.45
ITCHQ96J02 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.88■□□□□ 0.45
ITCHQ96J02 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.88■□□□□ 0.45
ITCHQ96J02 ABALON-201ENST00000629058 1903 ntBASIC17.88■□□□□ 0.45
ITCHQ96J02 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ITCHQ96J02 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ITCHQ96J02 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITCHQ96J02 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.88■□□□□ 0.45
ITCHQ96J02 AC104771.1-201ENST00000603335 964 ntBASIC17.88■□□□□ 0.45
ITCHQ96J02 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms