Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 AL512353.2-201ENST00000448759 1962 ntBASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 AC008550.1-201ENST00000511500 884 ntBASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC9CQ8N5M4 AC096733.2-201ENST00000609937 1394 ntBASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 AC026471.5-201ENST00000615068 467 ntBASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TTC9CQ8N5M4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 HEIH-201ENST00000623091 1652 ntBASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 KRT8P32-201ENST00000512863 1461 ntBASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 REXO1L10P-201ENST00000615707 1290 ntBASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 REXO1L12P-201ENST00000622156 912 ntBASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TTC9CQ8N5M4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms