Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 SOX15-203ENST00000570788 1093 ntBASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 KRT8P45-201ENST00000414328 1447 ntBASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 KRT8P3-201ENST00000519669 1449 ntBASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 NBPF21P-201ENST00000425093 1451 ntBASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 PRSS44-201ENST00000515154 1146 ntBASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 AL137784.2-201ENST00000607332 1000 ntBASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 AC020763.4-201ENST00000623414 4170 ntBASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01561Q8N1V8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 POU5F1P3-201ENST00000428824 1078 ntBASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 TSPY6P-201ENST00000448518 926 ntBASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 AC092437.1-201ENST00000624794 1048 ntBASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 MTMR9LP-203ENST00000426597 1545 ntBASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 KRT8P41-201ENST00000533985 1514 ntBASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms