Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CTR9Q6PD62 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CTR9Q6PD62 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.29■■□□□ 1.16
CTR9Q6PD62 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.29■■□□□ 1.16
CTR9Q6PD62 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CTR9Q6PD62 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTR9Q6PD62 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTR9Q6PD62 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTR9Q6PD62 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.29■■□□□ 1.16
CTR9Q6PD62 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.29■■□□□ 1.16
CTR9Q6PD62 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.29■■□□□ 1.16
CTR9Q6PD62 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.29■■□□□ 1.16
CTR9Q6PD62 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.29■■□□□ 1.16
CTR9Q6PD62 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CTR9Q6PD62 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.29■■□□□ 1.16
CTR9Q6PD62 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.29■■□□□ 1.16
CTR9Q6PD62 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CTR9Q6PD62 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.29■■□□□ 1.16
CTR9Q6PD62 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.29■■□□□ 1.16
CTR9Q6PD62 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTR9Q6PD62 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTR9Q6PD62 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CTR9Q6PD62 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTR9Q6PD62 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CTR9Q6PD62 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTR9Q6PD62 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTR9Q6PD62 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 AL359075.1-203ENST00000462729 1002 ntBASIC22.28■■□□□ 1.16
CTR9Q6PD62 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTR9Q6PD62 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTR9Q6PD62 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTR9Q6PD62 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CTR9Q6PD62 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.28■■□□□ 1.16
CTR9Q6PD62 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
CTR9Q6PD62 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.27■■□□□ 1.16
CTR9Q6PD62 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 HOMER2P1-201ENST00000455653 964 ntBASIC22.27■■□□□ 1.16
CTR9Q6PD62 AC092647.4-201ENST00000457211 535 ntBASIC22.27■■□□□ 1.16
CTR9Q6PD62 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC22.27■■□□□ 1.16
CTR9Q6PD62 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.27■■□□□ 1.16
CTR9Q6PD62 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.27■■□□□ 1.16
CTR9Q6PD62 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.27■■□□□ 1.16
CTR9Q6PD62 LINC01238-205ENST00000567549 1107 ntBASIC22.27■■□□□ 1.16
CTR9Q6PD62 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CTR9Q6PD62 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.27■■□□□ 1.16
CTR9Q6PD62 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.27■■□□□ 1.16
CTR9Q6PD62 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CTR9Q6PD62 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
CTR9Q6PD62 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.27■■□□□ 1.15
CTR9Q6PD62 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CTR9Q6PD62 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.26■■□□□ 1.15
CTR9Q6PD62 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.26■■□□□ 1.15
CTR9Q6PD62 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 AL031133.1-201ENST00000406807 723 ntBASIC22.26■■□□□ 1.15
CTR9Q6PD62 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.26■■□□□ 1.15
CTR9Q6PD62 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.26■■□□□ 1.15
CTR9Q6PD62 AC087388.1-201ENST00000571370 1112 ntBASIC22.26■■□□□ 1.15
CTR9Q6PD62 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.26■■□□□ 1.15
CTR9Q6PD62 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
CTR9Q6PD62 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.26■■□□□ 1.15
CTR9Q6PD62 AC024243.1-201ENST00000609234 778 ntBASIC22.26■■□□□ 1.15
CTR9Q6PD62 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CTR9Q6PD62 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CTR9Q6PD62 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.26■■□□□ 1.15
CTR9Q6PD62 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms