Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.21□□□□□ -0.13
MRPL54Q6P161 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
MRPL54Q6P161 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
MRPL54Q6P161 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.21□□□□□ -0.14
MRPL54Q6P161 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.21□□□□□ -0.14
MRPL54Q6P161 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.21□□□□□ -0.14
MRPL54Q6P161 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MRPL54Q6P161 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MRPL54Q6P161 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.21□□□□□ -0.14
MRPL54Q6P161 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.21□□□□□ -0.14
MRPL54Q6P161 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.21□□□□□ -0.14
MRPL54Q6P161 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 AC104187.1-201ENST00000607510 612 ntBASIC14.2□□□□□ -0.14
MRPL54Q6P161 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL54Q6P161 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.2□□□□□ -0.14
MRPL54Q6P161 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.19□□□□□ -0.14
MRPL54Q6P161 SDHAP1-207ENST00000440850 2000 ntBASIC14.19□□□□□ -0.14
MRPL54Q6P161 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.19□□□□□ -0.14
MRPL54Q6P161 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 UNC93B3-201ENST00000308076 687 ntBASIC14.19□□□□□ -0.14
MRPL54Q6P161 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
MRPL54Q6P161 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.19□□□□□ -0.14
MRPL54Q6P161 AC024257.2-201ENST00000549699 147 ntBASIC14.19□□□□□ -0.14
MRPL54Q6P161 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.19□□□□□ -0.14
MRPL54Q6P161 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.19□□□□□ -0.14
MRPL54Q6P161 AC083906.6-201ENST00000641366 219 ntBASIC14.19□□□□□ -0.14
MRPL54Q6P161 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.19□□□□□ -0.14
MRPL54Q6P161 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.19□□□□□ -0.14
MRPL54Q6P161 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.19□□□□□ -0.14
MRPL54Q6P161 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL54Q6P161 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MRPL54Q6P161 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms