Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HIST2H2BCQ6DN03 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 HLA-J-201ENST00000462773 1622 ntBASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 AL353692.3-201ENST00000407031 1396 ntBASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 SPCS2P1-201ENST00000561636 679 ntBASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 AC005336.2-201ENST00000593183 939 ntBASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2BCQ6DN03 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 AP001271.2-201ENST00000624018 1556 ntBASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 MIR1199-201ENST00000621445 119 ntBASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2BCQ6DN03 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 UNC93B6-202ENST00000528242 690 ntBASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 MTDHP5-201ENST00000598980 586 ntBASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2BCQ6DN03 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2BCQ6DN03 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms