Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SFT2D3Q587I9 MIR4497-201ENST00000583208 89 ntBASIC18.37■□□□□ 0.53
SFT2D3Q587I9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SFT2D3Q587I9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SFT2D3Q587I9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.37■□□□□ 0.53
SFT2D3Q587I9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SFT2D3Q587I9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SFT2D3Q587I9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SFT2D3Q587I9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.37■□□□□ 0.53
SFT2D3Q587I9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.37■□□□□ 0.53
SFT2D3Q587I9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SFT2D3Q587I9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 AL353807.1-201ENST00000427475 662 ntBASIC18.36■□□□□ 0.53
SFT2D3Q587I9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 AF186192.3-201ENST00000583427 947 ntBASIC18.36■□□□□ 0.53
SFT2D3Q587I9 AP001271.2-201ENST00000624018 1556 ntBASIC18.36■□□□□ 0.53
SFT2D3Q587I9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SFT2D3Q587I9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.35■□□□□ 0.53
SFT2D3Q587I9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 AC093525.10-201ENST00000625130 1569 ntBASIC18.35■□□□□ 0.53
SFT2D3Q587I9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 AC113410.3-201ENST00000623366 203 ntBASIC18.35■□□□□ 0.53
SFT2D3Q587I9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 Z98044.1-201ENST00000632503 1764 ntBASIC18.35■□□□□ 0.53
SFT2D3Q587I9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.35■□□□□ 0.53
SFT2D3Q587I9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 TSPY7P-201ENST00000431358 1114 ntBASIC18.34■□□□□ 0.53
SFT2D3Q587I9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 AP002982.1-201ENST00000492365 877 ntBASIC18.34■□□□□ 0.53
SFT2D3Q587I9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFT2D3Q587I9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms