Protein–RNA interactions for Protein: Q49AH0

CDNF, Cerebral dopamine neurotrophic factor, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDNFQ49AH0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CDNFQ49AH0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDNFQ49AH0 AC073592.3-201ENST00000625118 1834 ntBASIC16.15■□□□□ 0.18
CDNFQ49AH0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDNFQ49AH0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDNFQ49AH0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.14■□□□□ 0.17
CDNFQ49AH0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 AL121906.2-201ENST00000621597 723 ntBASIC16.14■□□□□ 0.17
CDNFQ49AH0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.14■□□□□ 0.17
CDNFQ49AH0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDNFQ49AH0 AC126763.1-201ENST00000552015 2118 ntBASIC16.13■□□□□ 0.17
CDNFQ49AH0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDNFQ49AH0 AC067852.2-201ENST00000590513 2313 ntBASIC16.13■□□□□ 0.17
CDNFQ49AH0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDNFQ49AH0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDNFQ49AH0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDNFQ49AH0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDNFQ49AH0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDNFQ49AH0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 TUBB8P6-201ENST00000436895 1288 ntBASIC16.13■□□□□ 0.17
CDNFQ49AH0 KRT18P16-201ENST00000510337 1294 ntBASIC16.13■□□□□ 0.17
CDNFQ49AH0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 AC105036.2-201ENST00000569468 176 ntBASIC16.13■□□□□ 0.17
CDNFQ49AH0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDNFQ49AH0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CDNFQ49AH0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms