Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.02■□□□□ 0.64
HADHAP40939 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.02■□□□□ 0.64
HADHAP40939 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HADHAP40939 AP000692.2-201ENST00000608391 879 ntBASIC19.02■□□□□ 0.64
HADHAP40939 AC026471.5-201ENST00000615068 467 ntBASIC19.02■□□□□ 0.64
HADHAP40939 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.02■□□□□ 0.64
HADHAP40939 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.02■□□□□ 0.64
HADHAP40939 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.02■□□□□ 0.64
HADHAP40939 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHAP40939 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HADHAP40939 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
HADHAP40939 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.02■□□□□ 0.63
HADHAP40939 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HADHAP40939 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.02■□□□□ 0.63
HADHAP40939 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
HADHAP40939 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HADHAP40939 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.01■□□□□ 0.63
HADHAP40939 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HADHAP40939 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHAP40939 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 AC090164.3-201ENST00000610780 2143 ntBASIC19.01■□□□□ 0.63
HADHAP40939 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHAP40939 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHAP40939 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHAP40939 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.01■□□□□ 0.63
HADHAP40939 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHAP40939 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHAP40939 MESTP1-201ENST00000404287 994 ntBASIC19.01■□□□□ 0.63
HADHAP40939 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHAP40939 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHAP40939 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHAP40939 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHAP40939 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.01■□□□□ 0.63
HADHAP40939 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHAP40939 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19■□□□□ 0.63
HADHAP40939 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19■□□□□ 0.63
HADHAP40939 WIZP1-201ENST00000531444 2299 ntBASIC19■□□□□ 0.63
HADHAP40939 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 NEFHP1-201ENST00000412845 2629 ntBASIC19■□□□□ 0.63
HADHAP40939 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
HADHAP40939 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19■□□□□ 0.63
HADHAP40939 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19■□□□□ 0.63
HADHAP40939 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19■□□□□ 0.63
HADHAP40939 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19■□□□□ 0.63
HADHAP40939 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19■□□□□ 0.63
HADHAP40939 MIR4785-201ENST00000585005 73 ntBASIC19■□□□□ 0.63
HADHAP40939 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19■□□□□ 0.63
HADHAP40939 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19■□□□□ 0.63
HADHAP40939 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19■□□□□ 0.63
HADHAP40939 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19■□□□□ 0.63
HADHAP40939 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19■□□□□ 0.63
HADHAP40939 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HADHAP40939 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.99■□□□□ 0.63
HADHAP40939 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HADHAP40939 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 AC008040.2-201ENST00000461049 708 ntBASIC18.99■□□□□ 0.63
HADHAP40939 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HADHAP40939 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.99■□□□□ 0.63
HADHAP40939 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms