Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SLC6A4P31645 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC6A4P31645 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SLC6A4P31645 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC6A4P31645 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC6A4P31645 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 MIR564-202ENST00000385049 94 ntBASIC19.28■□□□□ 0.68
SLC6A4P31645 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.28■□□□□ 0.68
SLC6A4P31645 AC092647.4-201ENST00000457211 535 ntBASIC19.28■□□□□ 0.68
SLC6A4P31645 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC6A4P31645 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC6A4P31645 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC6A4P31645 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC6A4P31645 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC6A4P31645 MTMR9LP-203ENST00000426597 1545 ntBASIC19.28■□□□□ 0.68
SLC6A4P31645 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC6A4P31645 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A4P31645 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A4P31645 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC6A4P31645 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SLC6A4P31645 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC6A4P31645 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.27■□□□□ 0.68
SLC6A4P31645 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SLC6A4P31645 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC6A4P31645 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A4P31645 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC6A4P31645 SPDYE15P-201ENST00000424157 909 ntBASIC19.27■□□□□ 0.68
SLC6A4P31645 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC6A4P31645 HOMER2P1-201ENST00000455653 964 ntBASIC19.27■□□□□ 0.68
SLC6A4P31645 LINC01238-205ENST00000567549 1107 ntBASIC19.27■□□□□ 0.68
SLC6A4P31645 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC6A4P31645 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC6A4P31645 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC6A4P31645 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC6A4P31645 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A4P31645 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC6A4P31645 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A4P31645 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A4P31645 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A4P31645 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A4P31645 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A4P31645 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A4P31645 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.27■□□□□ 0.67
SLC6A4P31645 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC6A4P31645 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A4P31645 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC6A4P31645 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A4P31645 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC6A4P31645 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SLC6A4P31645 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SLC6A4P31645 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.26■□□□□ 0.67
SLC6A4P31645 SEC1P-202ENST00000473944 940 ntBASIC19.26■□□□□ 0.67
SLC6A4P31645 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC6A4P31645 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SLC6A4P31645 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 AC087388.1-201ENST00000571370 1112 ntBASIC19.26■□□□□ 0.67
SLC6A4P31645 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A4P31645 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC6A4P31645 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A4P31645 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A4P31645 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A4P31645 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A4P31645 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A4P31645 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC6A4P31645 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms