Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 FEM1AP3-201ENST00000403722 1741 ntBASIC15.87■□□□□ 0.13
COL8A2P25067 AC093484.2-201ENST00000580996 2166 ntBASIC15.87■□□□□ 0.13
COL8A2P25067 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.87■□□□□ 0.13
COL8A2P25067 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
COL8A2P25067 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.86■□□□□ 0.13
COL8A2P25067 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.86■□□□□ 0.13
COL8A2P25067 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
COL8A2P25067 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
COL8A2P25067 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
COL8A2P25067 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.86■□□□□ 0.13
COL8A2P25067 AP000523.1-201ENST00000398242 1049 ntBASIC15.86■□□□□ 0.13
COL8A2P25067 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 KRT18P38-201ENST00000449496 1282 ntBASIC15.86■□□□□ 0.13
COL8A2P25067 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.86■□□□□ 0.13
COL8A2P25067 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.86■□□□□ 0.13
COL8A2P25067 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.86■□□□□ 0.13
COL8A2P25067 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.86■□□□□ 0.13
COL8A2P25067 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
COL8A2P25067 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
COL8A2P25067 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.86■□□□□ 0.13
COL8A2P25067 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.86■□□□□ 0.13
COL8A2P25067 MYC-208ENST00000641036 567 ntBASIC15.86■□□□□ 0.13
COL8A2P25067 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
COL8A2P25067 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 IRX1P1-201ENST00000438849 1838 ntBASIC15.86■□□□□ 0.13
COL8A2P25067 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.86■□□□□ 0.13
COL8A2P25067 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.86■□□□□ 0.13
COL8A2P25067 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
COL8A2P25067 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL8A2P25067 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.86■□□□□ 0.13
COL8A2P25067 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
COL8A2P25067 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
COL8A2P25067 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
COL8A2P25067 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.85■□□□□ 0.13
COL8A2P25067 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.85■□□□□ 0.13
COL8A2P25067 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.85■□□□□ 0.13
COL8A2P25067 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.85■□□□□ 0.13
COL8A2P25067 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
COL8A2P25067 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.85■□□□□ 0.13
COL8A2P25067 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 AL032819.2-201ENST00000624543 2162 ntBASIC15.85■□□□□ 0.13
COL8A2P25067 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.85■□□□□ 0.13
COL8A2P25067 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
COL8A2P25067 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
COL8A2P25067 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.85■□□□□ 0.13
COL8A2P25067 MCCD1P1-208ENST00000445732 328 ntBASIC15.85■□□□□ 0.13
COL8A2P25067 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.85■□□□□ 0.13
COL8A2P25067 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.85■□□□□ 0.13
COL8A2P25067 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.85■□□□□ 0.13
COL8A2P25067 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.85■□□□□ 0.13
COL8A2P25067 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
COL8A2P25067 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.85■□□□□ 0.13
COL8A2P25067 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.85■□□□□ 0.13
COL8A2P25067 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL8A2P25067 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.85■□□□□ 0.13
COL8A2P25067 AC141586.3-201ENST00000562166 1838 ntBASIC15.84■□□□□ 0.13
COL8A2P25067 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
COL8A2P25067 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 AC036111.1-201ENST00000533973 1582 ntBASIC15.84■□□□□ 0.13
COL8A2P25067 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
COL8A2P25067 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL8A2P25067 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms