Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.23■□□□□ 0.99
HOXC6P09630 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.23■□□□□ 0.99
HOXC6P09630 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC6P09630 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC6P09630 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
HOXC6P09630 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC6P09630 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HOXC6P09630 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.23■□□□□ 0.99
HOXC6P09630 RCC2P3-201ENST00000418112 1537 ntBASIC21.23■□□□□ 0.99
HOXC6P09630 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.23■□□□□ 0.99
HOXC6P09630 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.23■□□□□ 0.99
HOXC6P09630 AC008556.1-201ENST00000610908 2040 ntBASIC21.22■□□□□ 0.99
HOXC6P09630 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.22■□□□□ 0.99
HOXC6P09630 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.22■□□□□ 0.99
HOXC6P09630 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.22■□□□□ 0.99
HOXC6P09630 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HOXC6P09630 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.22■□□□□ 0.99
HOXC6P09630 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.22■□□□□ 0.99
HOXC6P09630 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 AP002469.2-201ENST00000531724 424 ntBASIC21.22■□□□□ 0.99
HOXC6P09630 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.22■□□□□ 0.99
HOXC6P09630 MIR3180-4-201ENST00000582223 153 ntBASIC21.22■□□□□ 0.99
HOXC6P09630 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.22■□□□□ 0.99
HOXC6P09630 SLC25A6P4-201ENST00000586535 553 ntBASIC21.22■□□□□ 0.99
HOXC6P09630 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HOXC6P09630 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
HOXC6P09630 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.22■□□□□ 0.99
HOXC6P09630 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC6P09630 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HOXC6P09630 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HOXC6P09630 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HOXC6P09630 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.21■□□□□ 0.99
HOXC6P09630 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HOXC6P09630 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.21■□□□□ 0.99
HOXC6P09630 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 AP003733.1-201ENST00000491725 852 ntBASIC21.21■□□□□ 0.99
HOXC6P09630 AC104819.1-201ENST00000504587 486 ntBASIC21.21■□□□□ 0.99
HOXC6P09630 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.21■□□□□ 0.99
HOXC6P09630 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
HOXC6P09630 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.21■□□□□ 0.99
HOXC6P09630 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.21■□□□□ 0.99
HOXC6P09630 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.21■□□□□ 0.99
HOXC6P09630 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.21■□□□□ 0.99
HOXC6P09630 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HOXC6P09630 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.21■□□□□ 0.99
HOXC6P09630 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HOXC6P09630 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HOXC6P09630 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HOXC6P09630 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC6P09630 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC6P09630 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC6P09630 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC6P09630 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC6P09630 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC6P09630 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXC6P09630 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC6P09630 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
HOXC6P09630 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC6P09630 MIR564-202ENST00000385049 94 ntBASIC21.2■□□□□ 0.98
HOXC6P09630 AL022342.1-201ENST00000400363 863 ntBASIC21.2■□□□□ 0.98
HOXC6P09630 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC6P09630 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC6P09630 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXC6P09630 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HOXC6P09630 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXC6P09630 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXC6P09630 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXC6P09630 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.19■□□□□ 0.98
HOXC6P09630 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC6P09630 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.19■□□□□ 0.98
HOXC6P09630 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC6P09630 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.19■□□□□ 0.98
HOXC6P09630 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC6P09630 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.19■□□□□ 0.98
HOXC6P09630 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC6P09630 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HOXC6P09630 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.19■□□□□ 0.98
HOXC6P09630 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC6P09630 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms