Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HMGN1P05114 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGN1P05114 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HMGN1P05114 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 AC126763.1-201ENST00000552015 2118 ntBASIC17.03■□□□□ 0.32
HMGN1P05114 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HMGN1P05114 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.03■□□□□ 0.32
HMGN1P05114 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.03■□□□□ 0.32
HMGN1P05114 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HMGN1P05114 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HMGN1P05114 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HMGN1P05114 GUSBP6-202ENST00000438529 1198 ntBASIC17.03■□□□□ 0.32
HMGN1P05114 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.03■□□□□ 0.32
HMGN1P05114 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGN1P05114 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.03■□□□□ 0.32
HMGN1P05114 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.03■□□□□ 0.32
HMGN1P05114 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGN1P05114 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.03■□□□□ 0.32
HMGN1P05114 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.03■□□□□ 0.32
HMGN1P05114 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HMGN1P05114 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HMGN1P05114 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
HMGN1P05114 HEIH-201ENST00000623091 1652 ntBASIC17.03■□□□□ 0.32
HMGN1P05114 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.03■□□□□ 0.32
HMGN1P05114 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGN1P05114 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGN1P05114 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.03■□□□□ 0.32
HMGN1P05114 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
HMGN1P05114 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMGN1P05114 AL133373.2-201ENST00000623187 2828 ntBASIC17.02■□□□□ 0.32
HMGN1P05114 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGN1P05114 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGN1P05114 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGN1P05114 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.02■□□□□ 0.32
HMGN1P05114 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGN1P05114 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGN1P05114 AC005332.8-201ENST00000622750 2735 ntBASIC17.02■□□□□ 0.32
HMGN1P05114 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.02■□□□□ 0.32
HMGN1P05114 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGN1P05114 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGN1P05114 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.02■□□□□ 0.32
HMGN1P05114 NCF1B-203ENST00000435988 1254 ntBASIC17.02■□□□□ 0.32
HMGN1P05114 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGN1P05114 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGN1P05114 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGN1P05114 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.02■□□□□ 0.32
HMGN1P05114 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.02■□□□□ 0.32
HMGN1P05114 HLA-A-209ENST00000638375 975 ntBASIC17.02■□□□□ 0.32
HMGN1P05114 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGN1P05114 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGN1P05114 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HMGN1P05114 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGN1P05114 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGN1P05114 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.02■□□□□ 0.31
HMGN1P05114 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGN1P05114 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGN1P05114 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HMGN1P05114 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
HMGN1P05114 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.02■□□□□ 0.31
HMGN1P05114 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGN1P05114 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGN1P05114 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HMGN1P05114 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
HMGN1P05114 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
HMGN1P05114 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGN1P05114 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGN1P05114 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms