Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.24■□□□□ 0.67
MT-CO1P00395 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO1P00395 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
MT-CO1P00395 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.24■□□□□ 0.67
MT-CO1P00395 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO1P00395 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO1P00395 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO1P00395 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-CO1P00395 GPAT2P1-201ENST00000444924 1672 ntBASIC19.24■□□□□ 0.67
MT-CO1P00395 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.23■□□□□ 0.67
MT-CO1P00395 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
MT-CO1P00395 FP475955.4-201ENST00000623131 1990 ntBASIC19.23■□□□□ 0.67
MT-CO1P00395 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.23■□□□□ 0.67
MT-CO1P00395 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
MT-CO1P00395 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.23■□□□□ 0.67
MT-CO1P00395 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.23■□□□□ 0.67
MT-CO1P00395 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.23■□□□□ 0.67
MT-CO1P00395 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MT-CO1P00395 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
MT-CO1P00395 KRT8P3-201ENST00000519669 1449 ntBASIC19.23■□□□□ 0.67
MT-CO1P00395 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
MT-CO1P00395 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.23■□□□□ 0.67
MT-CO1P00395 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-CO1P00395 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MT-CO1P00395 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.22■□□□□ 0.67
MT-CO1P00395 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-CO1P00395 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-CO1P00395 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.22■□□□□ 0.67
MT-CO1P00395 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MT-CO1P00395 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.22■□□□□ 0.67
MT-CO1P00395 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
MT-CO1P00395 AC141257.4-201ENST00000634557 245 ntBASIC19.22■□□□□ 0.67
MT-CO1P00395 AC136944.6-201ENST00000634818 245 ntBASIC19.22■□□□□ 0.67
MT-CO1P00395 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.22■□□□□ 0.67
MT-CO1P00395 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-CO1P00395 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-CO1P00395 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.21■□□□□ 0.67
MT-CO1P00395 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MT-CO1P00395 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
MT-CO1P00395 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.21■□□□□ 0.67
MT-CO1P00395 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 BX664615.1-201ENST00000443558 458 ntBASIC19.21■□□□□ 0.67
MT-CO1P00395 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MT-CO1P00395 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MT-CO1P00395 TNXA-203ENST00000507684 2038 ntBASIC19.21■□□□□ 0.67
MT-CO1P00395 AC139887.4-201ENST00000607877 719 ntBASIC19.21■□□□□ 0.67
MT-CO1P00395 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-CO1P00395 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
MT-CO1P00395 AL049812.1-201ENST00000432563 2267 ntBASIC19.21■□□□□ 0.67
MT-CO1P00395 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO1P00395 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO1P00395 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms